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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170478088
CEVK01009826
232119
Gammaproteobacteria
ACG
Arg
>WENV170478087
CEVK01009826
232119
Gammaproteobacteria
ACG
Arg
>WENV170478126
CEVK01014666
186591
Gammaproteobacteria
ACG
Arg
>WENV170478904
CEVK01105613
183804
Gammaproteobacteria
CAT
Met
>WENV170478847
CEVK01100675
180678
Gammaproteobacteria
CCG
Arg
>WENV170478771
CEVK01090940
401684
Gammaproteobacteria
CCT
Arg
>WENV170478306
CEVK01034207
176301
Gammaproteobacteria
GAT
Ile
>WENV170478086
CEVK01009826
20664
Gammaproteobacteria
GCT
Ser
>WENV170479230
CEVK01207931
56694
Gammaproteobacteria
GGA
Ser
>WENV170479076
CEVK01165716
176061
Gammaproteobacteria
TCG
Arg
>WENV170478541
CEVK01062508
198275
Gammaproteobacteria
TCT
Arg
>WENV170478109
CEVK01013031
297858
Gammaproteobacteria
TGC
Ala
>WENV170478732
CEVK01086456
297858
Gammaproteobacteria
TGC
Ala
>WENV170478227
CEVK01025533
197498
Gammaproteobacteria
TGG
Pro
>WENV170479075
CEVK01165716
301064
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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