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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170479534
CEVL01020462
284706
Gammaproteobacteria
GTT
Asn
>WENV170479555
CEVL01022145
158246
Gammaproteobacteria
GTC
Asp
>WENV170479821
CEVL01041313
363863
Gammaproteobacteria
CCA
Trp
>WENV170481638
CEVL01298078
297858
Gammaproteobacteria
TGC
Ala
>WENV170481154
CEVL01168928
209464
Gammaproteobacteria
CCG
Arg
>WENV170481115
CEVL01166465
179284
Gammaproteobacteria
CAT
Met
>WENV170481328
CEVL01179423
282550
Gammaproteobacteria
TAC
Val
>WENV170479437
CEVL01012509
329164
Gammaproteobacteria
TTT
Lys
>WENV170480379
CEVL01094626
292006
Gammaproteobacteria
TGC
Ala
>WENV170480612
CEVL01121584
350703
Gammaproteobacteria
TTT
Lys
>WENV170481284
CEVL01177509
243308
Gammaproteobacteria
TGG
Pro
>WENV170480888
CEVL01146617
197498
Gammaproteobacteria
TGG
Pro
>WENV170480927
CEVL01149778
178169
Gammaproteobacteria
GAC
Val
>WENV170481132
CEVL01167596
287558
Gammaproteobacteria
TTC
Glu
>WENV170480378
CEVL01094626
176301
Gammaproteobacteria
GAT
Ile
>WENV170479868
CEVL01044482
176301
Gammaproteobacteria
GAT
Ile
>WENV170479536
CEVL01020664
176301
Gammaproteobacteria
GAT
Ile
>WENV170480746
CEVL01134455
230011
Gammaproteobacteria
ACG
Arg
>WENV170481094
CEVL01164922
282018
Gammaproteobacteria
TGT
Thr
>WENV170481672
CEVL01310750
282902
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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