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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170482042
CEVM01002844
292006
Gammaproteobacteria
TGC
Ala
>WENV170482041
CEVM01002844
176301
Gammaproteobacteria
GAT
Ile
>WENV170482144
CEVM01009045
92638
Gammaproteobacteria
TAA
Leu
>WENV170482143
CEVM01009045
481678
Gammaproteobacteria
GCA
Cys
>WENV170482178
CEVM01011184
306288
Gammaproteobacteria
GCC
Gly
>WENV170482244
CEVM01015453
180678
Gammaproteobacteria
CCG
Arg
>WENV170482268
CEVM01017840
176301
Gammaproteobacteria
GAT
Ile
>WENV170482290
CEVM01019443
178471
Gammaproteobacteria
GTT
Asn
>WENV170482506
CEVM01036227
176301
Gammaproteobacteria
GAT
Ile
>WENV170482591
CEVM01042928
176301
Gammaproteobacteria
GAT
Ile
>WENV170482788
CEVM01059567
180681
Gammaproteobacteria
TGG
Pro
>WENV170482826
CEVM01062364
177028
Gammaproteobacteria
CAT
Met
>WENV170482904
CEVM01069736
197498
Gammaproteobacteria
TGG
Pro
>WENV170483192
CEVM01099122
312181
Gammaproteobacteria
TTT
Lys
>WENV170483200
CEVM01100080
201377
Gammaproteobacteria
TGG
Pro
>WENV170483229
CEVM01102808
74048
Gammaproteobacteria
CAA
Leu
>WENV170483237
CEVM01104095
371341
Gammaproteobacteria
GTT
Asn
>WENV170483377
CEVM01115273
183804
Gammaproteobacteria
CAT
Met
>WENV170483680
CEVM01138364
73044
Gammaproteobacteria
CAG
Leu
>WENV170483813
CEVM01192865
307269
Gammaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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