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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170552458
CXWK01000096
359851
Actinobacteria
GCC
Gly
>WENV170553428
CXWK01018023
308433
Actinobacteria
CCA
Trp
>WENV170553584
CXWK01023970
177965
Actinobacteria
GTC
Asp
>WENV170553953
CXWK01039393
74688
Actinobacteria
CAG
Leu
>WENV170554042
CXWK01044326
179229
Actinobacteria
GTC
Asp
>WENV170554273
CXWK01058245
191257
Actinobacteria
CGG
Pro
>WENV170554414
CXWK01067839
46676
Actinobacteria
GGA
Ser
>WENV170554427
CXWK01068944
294855
Actinobacteria
TGG
Pro
>WENV170554460
CXWK01071390
511498
Actinobacteria
TCC
Gly
>WENV170554520
CXWK01075606
184635
Actinobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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