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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
144 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV003031
AY962315
358471
Alphaproteobacteria
TGC
Ala
>ENV000058
AB236005
290043
Alphaproteobacteria
TGC
Ala
>ENV001098
AY484734
193088
Alphaproteobacteria
GAT
Ile
>ENV001314
AY627380
193088
Alphaproteobacteria
GAT
Ile
>ENV002170
AY933953
193088
Alphaproteobacteria
GAT
Ile
>ENV002172
AY933954
193088
Alphaproteobacteria
GAT
Ile
>ENV002290
AY934016
193088
Alphaproteobacteria
GAT
Ile
>ENV002308
AY934028
193088
Alphaproteobacteria
GAT
Ile
>ENV002310
AY934029
193088
Alphaproteobacteria
GAT
Ile
>ENV002312
AY934030
193088
Alphaproteobacteria
GAT
Ile
>ENV002314
AY934031
193088
Alphaproteobacteria
GAT
Ile
>ENV002328
AY934039
193088
Alphaproteobacteria
GAT
Ile
>ENV002342
AY934046
193088
Alphaproteobacteria
GAT
Ile
>ENV002359
AY934055
193088
Alphaproteobacteria
GAT
Ile
>ENV002385
AY934068
193088
Alphaproteobacteria
GAT
Ile
>ENV002400
AY934078
193088
Alphaproteobacteria
GAT
Ile
>ENV003481
DQ009288
193088
Alphaproteobacteria
GAT
Ile
>ENV000920
AY033324
281659
Alphaproteobacteria
TGC
Ala
>ENV003466
DQ009280
281659
Alphaproteobacteria
TGC
Ala
>ENV003468
DQ009281
281659
Alphaproteobacteria
TGC
Ala
>ENV003470
DQ009282
281659
Alphaproteobacteria
TGC
Ala
>ENV003472
DQ009283
281659
Alphaproteobacteria
TGC
Ala
>ENV003474
DQ009284
281659
Alphaproteobacteria
TGC
Ala
>ENV003708
DQ009417
281659
Alphaproteobacteria
TGC
Ala
>ENV003710
DQ009418
281659
Alphaproteobacteria
TGC
Ala
>ENV000187
AF151245
221998
Alphaproteobacteria
GAT
Ile
>ENV000237
AF151270
221998
Alphaproteobacteria
GAT
Ile
>ENV000241
AF151272
221998
Alphaproteobacteria
GAT
Ile
>ENV000243
AF151273
221998
Alphaproteobacteria
GAT
Ile
>ENV000249
AF151276
221998
Alphaproteobacteria
GAT
Ile
>ENV000251
AF151277
221998
Alphaproteobacteria
GAT
Ile
>ENV000253
AF151278
221998
Alphaproteobacteria
GAT
Ile
>ENV000289
AF151296
221998
Alphaproteobacteria
GAT
Ile
>ENV000295
AF151299
221998
Alphaproteobacteria
GAT
Ile
>ENV001018
AY458633
221998
Alphaproteobacteria
GAT
Ile
>ENV001028
AY458637
221998
Alphaproteobacteria
GAT
Ile
>ENV001682
AY933694
221998
Alphaproteobacteria
GAT
Ile
>ENV001684
AY933695
221998
Alphaproteobacteria
GAT
Ile
>ENV001698
AY933702
221998
Alphaproteobacteria
GAT
Ile
>ENV001702
AY933704
221998
Alphaproteobacteria
GAT
Ile
>ENV001704
AY933705
221998
Alphaproteobacteria
GAT
Ile
>ENV001707
AY933707
221998
Alphaproteobacteria
GAT
Ile
>ENV001709
AY933708
221998
Alphaproteobacteria
GAT
Ile
>ENV001767
AY933739
221998
Alphaproteobacteria
GAT
Ile
>ENV001769
AY933740
221998
Alphaproteobacteria
GAT
Ile
>ENV001866
AY933792
221998
Alphaproteobacteria
GAT
Ile
>ENV001868
AY933793
221998
Alphaproteobacteria
GAT
Ile
>ENV001926
AY933824
221998
Alphaproteobacteria
GAT
Ile
>ENV001947
AY933835
221998
Alphaproteobacteria
GAT
Ile
>ENV002105
AY933920
221998
Alphaproteobacteria
GAT
Ile
>ENV002107
AY933921
221998
Alphaproteobacteria
GAT
Ile
>ENV002109
AY933922
221998
Alphaproteobacteria
GAT
Ile
>ENV002111
AY933923
221998
Alphaproteobacteria
GAT
Ile
>ENV002113
AY933924
221998
Alphaproteobacteria
GAT
Ile
>ENV002115
AY933925
221998
Alphaproteobacteria
GAT
Ile
>ENV002117
AY933926
221998
Alphaproteobacteria
GAT
Ile
>ENV002119
AY933927
221998
Alphaproteobacteria
GAT
Ile
>ENV002121
AY933928
221998
Alphaproteobacteria
GAT
Ile
>ENV002123
AY933929
221998
Alphaproteobacteria
GAT
Ile
>ENV002125
AY933930
221998
Alphaproteobacteria
GAT
Ile
>ENV002127
AY933931
221998
Alphaproteobacteria
GAT
Ile
>ENV002129
AY933932
221998
Alphaproteobacteria
GAT
Ile
>ENV002131
AY933933
221998
Alphaproteobacteria
GAT
Ile
>ENV002133
AY933934
221998
Alphaproteobacteria
GAT
Ile
>ENV002135
AY933935
221998
Alphaproteobacteria
GAT
Ile
>ENV002146
AY933941
221998
Alphaproteobacteria
GAT
Ile
>ENV002156
AY933946
221998
Alphaproteobacteria
GAT
Ile
>ENV002158
AY933947
221998
Alphaproteobacteria
GAT
Ile
>ENV002162
AY933949
221998
Alphaproteobacteria
GAT
Ile
>ENV002166
AY933951
221998
Alphaproteobacteria
GAT
Ile
>ENV002174
AY933955
221998
Alphaproteobacteria
GAT
Ile
>ENV002178
AY933957
221998
Alphaproteobacteria
GAT
Ile
>ENV002180
AY933958
221998
Alphaproteobacteria
GAT
Ile
>ENV002182
AY933959
221998
Alphaproteobacteria
GAT
Ile
>ENV002184
AY933960
221998
Alphaproteobacteria
GAT
Ile
>ENV002186
AY933961
221998
Alphaproteobacteria
GAT
Ile
>ENV002188
AY933962
221998
Alphaproteobacteria
GAT
Ile
>ENV002192
AY933965
221998
Alphaproteobacteria
GAT
Ile
>ENV002195
AY933967
221998
Alphaproteobacteria
GAT
Ile
>ENV002197
AY933968
221998
Alphaproteobacteria
GAT
Ile
>ENV002199
AY933969
221998
Alphaproteobacteria
GAT
Ile
>ENV002201
AY933970
221998
Alphaproteobacteria
GAT
Ile
>ENV002203
AY933971
221998
Alphaproteobacteria
GAT
Ile
>ENV002209
AY933974
221998
Alphaproteobacteria
GAT
Ile
>ENV002211
AY933975
221998
Alphaproteobacteria
GAT
Ile
>ENV002215
AY933977
221998
Alphaproteobacteria
GAT
Ile
>ENV002217
AY933978
221998
Alphaproteobacteria
GAT
Ile
>ENV002221
AY933980
221998
Alphaproteobacteria
GAT
Ile
>ENV002223
AY933981
221998
Alphaproteobacteria
GAT
Ile
>ENV002225
AY933982
221998
Alphaproteobacteria
GAT
Ile
>ENV002227
AY933983
221998
Alphaproteobacteria
GAT
Ile
>ENV002229
AY933984
221998
Alphaproteobacteria
GAT
Ile
>ENV002233
AY933986
221998
Alphaproteobacteria
GAT
Ile
>ENV002235
AY933987
221998
Alphaproteobacteria
GAT
Ile
>ENV002237
AY933988
221998
Alphaproteobacteria
GAT
Ile
>ENV002241
AY933990
221998
Alphaproteobacteria
GAT
Ile
>ENV002253
AY933996
221998
Alphaproteobacteria
GAT
Ile
>ENV002267
AY934004
221998
Alphaproteobacteria
GAT
Ile
>ENV002271
AY934006
221998
Alphaproteobacteria
GAT
Ile
>ENV002401
AY934079
221998
Alphaproteobacteria
GAT
Ile
>ENV002524
AY934157
221998
Alphaproteobacteria
GAT
Ile
>ENV002693
AY934244
221998
Alphaproteobacteria
GAT
Ile
>ENV002718
AY934257
221998
Alphaproteobacteria
GAT
Ile
>ENV003733
DQ009435
221998
Alphaproteobacteria
GAT
Ile
>ENV003735
DQ009436
221998
Alphaproteobacteria
GAT
Ile
>ENV003737
DQ009437
221998
Alphaproteobacteria
GAT
Ile
>ENV003739
DQ009438
221998
Alphaproteobacteria
GAT
Ile
>ENV003741
DQ009439
221998
Alphaproteobacteria
GAT
Ile
>ENV003747
DQ009442
221998
Alphaproteobacteria
GAT
Ile
>ENV003749
DQ009443
221998
Alphaproteobacteria
GAT
Ile
>ENV003773
DQ009455
221998
Alphaproteobacteria
GAT
Ile
>ENV002330
AY934040
176633
Alphaproteobacteria
GAT
Ile
>ENV002336
AY934043
176633
Alphaproteobacteria
GAT
Ile
>ENV002354
AY934052
176633
Alphaproteobacteria
GAT
Ile
>ENV002377
AY934064
176633
Alphaproteobacteria
GAT
Ile
>ENV002436
AY934099
195438
Alphaproteobacteria
GAT
Ile
>ENV002432
AY934097
195438
Alphaproteobacteria
GAT
Ile
>ENV002430
AY934096
195438
Alphaproteobacteria
GAT
Ile
>ENV002415
AY934088
195438
Alphaproteobacteria
GAT
Ile
>ENV002410
AY934085
195438
Alphaproteobacteria
GAT
Ile
>ENV002397
AY934077
195438
Alphaproteobacteria
GAT
Ile
>ENV000463
AF422571
195438
Alphaproteobacteria
GAT
Ile
>ENV000462
AF422570
195438
Alphaproteobacteria
GAT
Ile
>ENV000460
AF422568
195438
Alphaproteobacteria
GAT
Ile
>ENV000459
AF422567
195438
Alphaproteobacteria
GAT
Ile
>ENV000456
AF422565
195438
Alphaproteobacteria
GAT
Ile
>ENV000452
AF422562
195438
Alphaproteobacteria
GAT
Ile
>ENV000443
AF422557
195438
Alphaproteobacteria
GAT
Ile
>ENV000438
AF422554
195438
Alphaproteobacteria
GAT
Ile
>ENV000087
AB276079
195438
Alphaproteobacteria
GAT
Ile
>ENV000197
AF151250
195438
Alphaproteobacteria
GAT
Ile
>ENV000404
AF422529
195438
Alphaproteobacteria
GAT
Ile
>ENV000407
AF422531
195438
Alphaproteobacteria
GAT
Ile
>ENV000409
AF422533
195438
Alphaproteobacteria
GAT
Ile
>ENV000411
AF422534
195438
Alphaproteobacteria
GAT
Ile
>ENV000416
AF422538
195438
Alphaproteobacteria
GAT
Ile
>ENV000420
AF422541
195438
Alphaproteobacteria
GAT
Ile
>ENV000430
AF422549
195438
Alphaproteobacteria
GAT
Ile
>ENV000432
AF422550
195438
Alphaproteobacteria
GAT
Ile
>ENV000437
AF422553
195438
Alphaproteobacteria
GAT
Ile
>ENV000461
AF422569
352375
Alphaproteobacteria
TGC
Ala
>ENV001330
AY713454
352375
Alphaproteobacteria
TGC
Ala
>ENV004028
DQ190812
352375
Alphaproteobacteria
TGC
Ala
>ENV004266
DQ491463
352375
Alphaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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