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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180007043
FLRZ01086204
481044
Bacteroidetes
>WENV180007293
FLRZ01308930
147999
Bacteroidetes
CAA
Leu
>WENV180006794
FLRZ01000402
178572
Bacteroidetes
CAT
Met
>WENV180007081
FLRZ01107807
178572
Bacteroidetes
CAT
Met
>WENV180007160
FLRZ01166315
178572
Bacteroidetes
CAT
Met
>WENV180006799
FLRZ01000459
284457
Bacteroidetes
CAT
Met
>WENV180006938
FLRZ01035200
284457
Bacteroidetes
CAT
Met
>WENV180006932
FLRZ01031903
283316
Bacteroidetes
CCA
Trp
>WENV180007057
FLRZ01091315
312035
Bacteroidetes
CCA
Trp
>WENV180006897
FLRZ01014686
481045
Bacteroidetes
CCC
Gly
>WENV180007234
FLRZ01245634
481045
Bacteroidetes
CCC
Gly
>WENV180007290
FLRZ01305777
481045
Bacteroidetes
CCC
Gly
>WENV180006937
FLRZ01033025
400949
Bacteroidetes
CCT
Arg
>WENV180007009
FLRZ01062226
400949
Bacteroidetes
CCT
Arg
>WENV180007237
FLRZ01251995
400949
Bacteroidetes
CCT
Arg
>WENV180006861
FLRZ01002749
404662
Bacteroidetes
CCT
Arg
>WENV180007104
FLRZ01128866
284456
Bacteroidetes
CGG
Pro
>WENV180006896
FLRZ01014686
283315
Bacteroidetes
CGT
Thr
>WENV180007233
FLRZ01245634
283315
Bacteroidetes
CGT
Thr
>WENV180007279
FLRZ01287478
404109
Bacteroidetes
CTC
Glu
>WENV180007042
FLRZ01085184
481267
Bacteroidetes
CTG
Gln
>WENV180006913
FLRZ01020931
290468
Bacteroidetes
CTT
Lys
>WENV180007226
FLRZ01241998
73509
Bacteroidetes
GAG
Leu
>WENV180006921
FLRZ01026509
482908
Bacteroidetes
GCA
Cys
>WENV180007198
FLRZ01201538
280478
Bacteroidetes
GCC
Gly
>WENV180007040
FLRZ01084510
20533
Bacteroidetes
GGA
Ser
>WENV180006952
FLRZ01039131
156128
Bacteroidetes
GGG
Pro
>WENV180006807
FLRZ01000617
156383
Bacteroidetes
GGG
Pro
>WENV180006955
FLRZ01039761
404663
Bacteroidetes
GGT
Thr
>WENV180006941
FLRZ01035901
118220
Bacteroidetes
GTA
Tyr
>WENV180006926
FLRZ01028680
187814
Bacteroidetes
GTC
Asp
>WENV180006927
FLRZ01028680
187814
Bacteroidetes
GTC
Asp
>WENV180006949
FLRZ01037425
404661
Bacteroidetes
GTG
His
>WENV180007192
FLRZ01193747
179653
Bacteroidetes
GTG
His
>WENV180007084
FLRZ01110029
178571
Bacteroidetes
GTT
Asn
>WENV180007117
FLRZ01136236
178571
Bacteroidetes
GTT
Asn
>WENV180006974
FLRZ01048985
187400
Bacteroidetes
GTT
Asn
>WENV180006804
FLRZ01000583
46648
Bacteroidetes
TAA
Leu
>WENV180006805
FLRZ01000583
46648
Bacteroidetes
TAA
Leu
>WENV180007131
FLRZ01143817
46648
Bacteroidetes
TAA
Leu
>WENV180007243
FLRZ01258649
46648
Bacteroidetes
TAA
Leu
>WENV180007193
FLRZ01194791
156422
Bacteroidetes
TAC
Val
>WENV180006979
FLRZ01049984
118379
Bacteroidetes
TAG
Leu
>WENV180006903
FLRZ01018475
119584
Bacteroidetes
TAG
Leu
>WENV180007049
FLRZ01088441
185159
Bacteroidetes
TCT
Arg
>WENV180007152
FLRZ01156156
57645
Bacteroidetes
TGA
Ser
>WENV180007119
FLRZ01136780
191205
Bacteroidetes
TGG
Pro
>WENV180006977
FLRZ01049510
400815
Bacteroidetes
TTC
Glu
>WENV180006965
FLRZ01045329
416636
Bacteroidetes
TTC
Glu
>WENV180007080
FLRZ01107322
416636
Bacteroidetes
TTC
Glu
>WENV180007027
FLRZ01074354
481328
Bacteroidetes
TTG
Gln
>WENV180007114
FLRZ01135533
284237
Bacteroidetes
TTT
Lys
>WENV180006889
FLRZ01012427
290467
Bacteroidetes
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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