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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
180 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180008703
FLSB01109555
234991
Bacillota
GAT
Ile
>WENV180008467
FLSB01035293
289121
Bacillota
CCA
Trp
>WENV180007910
FLSB01001079
184537
Bacillota
ACG
Arg
>WENV180008734
FLSB01116997
184537
Bacillota
ACG
Arg
>WENV180008847
FLSB01179446
184537
Bacillota
ACG
Arg
>WENV180008935
FLSB01228899
184537
Bacillota
ACG
Arg
>WENV180008975
FLSB01261481
184537
Bacillota
ACG
Arg
>WENV180009007
FLSB01267549
184537
Bacillota
ACG
Arg
>WENV180009064
FLSB01302689
184537
Bacillota
ACG
Arg
>WENV180007853
FLSB01000318
408526
Bacillota
GCA
Cys
>WENV180008402
FLSB01025172
408526
Bacillota
GCA
Cys
>WENV180008408
FLSB01025643
408526
Bacillota
GCA
Cys
>WENV180007927
FLSB01001215
296855
Bacillota
GGT
Thr
>WENV180008466
FLSB01035293
287508
Bacillota
GTG
His
>WENV180008397
FLSB01025006
48505
Bacillota
TGA
Ser
>WENV180008210
FLSB01006037
48505
Bacillota
TGA
Ser
>WENV180008209
FLSB01006026
48505
Bacillota
TGA
Ser
>WENV180007899
FLSB01000947
48505
Bacillota
TGA
Ser
>WENV180007875
FLSB01000506
183994
Bacillota
TCT
Arg
>WENV180008693
FLSB01103747
231532
Bacillota
ACG
Arg
>WENV180009093
FLSB01316863
289717
Bacillota
CTT
Lys
>WENV180009069
FLSB01303159
289717
Bacillota
CTT
Lys
>WENV180009053
FLSB01297505
289717
Bacillota
CTT
Lys
>WENV180008911
FLSB01213722
289717
Bacillota
CTT
Lys
>WENV180008678
FLSB01099227
289717
Bacillota
CTT
Lys
>WENV180008247
FLSB01008468
289717
Bacillota
CTT
Lys
>WENV180008021
FLSB01002833
405874
Bacillota
TTC
Glu
>WENV180007917
FLSB01001142
405874
Bacillota
TTC
Glu
>WENV180008622
FLSB01079497
20932
Bacillota
GCT
Ser
>WENV180008611
FLSB01074336
20932
Bacillota
GCT
Ser
>WENV180007945
FLSB01001511
20932
Bacillota
GCT
Ser
>WENV180007944
FLSB01001488
20932
Bacillota
GCT
Ser
>WENV180008400
FLSB01025172
291553
Bacillota
GAA
Phe
>WENV180007883
FLSB01000673
291553
Bacillota
GAA
Phe
>WENV180007851
FLSB01000318
291553
Bacillota
GAA
Phe
>WENV180007971
FLSB01001956
283622
Bacillota
CTT
Lys
>WENV180009163
FLSB01331623
482593
Bacillota
CCC
Gly
>WENV180008861
FLSB01183808
482593
Bacillota
CCC
Gly
>WENV180008729
FLSB01115897
482593
Bacillota
CCC
Gly
>WENV180008679
FLSB01099620
482593
Bacillota
CCC
Gly
>WENV180008659
FLSB01089985
482593
Bacillota
CCC
Gly
>WENV180008489
FLSB01041553
482593
Bacillota
CCC
Gly
>WENV180008261
FLSB01009570
482593
Bacillota
CCC
Gly
>WENV180008009
FLSB01002779
482593
Bacillota
CCC
Gly
>WENV180007982
FLSB01002082
482593
Bacillota
CCC
Gly
>WENV180007938
FLSB01001447
482593
Bacillota
CCC
Gly
>WENV180008704
FLSB01109555
339995
Bacillota
TGC
Ala
>WENV180008919
FLSB01218695
20942
Bacillota
GGA
Ser
>WENV180008686
FLSB01101358
20942
Bacillota
GGA
Ser
>WENV180008426
FLSB01027670
100696
Bacillota
GTA
Tyr
>WENV180008424
FLSB01027670
100696
Bacillota
GTA
Tyr
>WENV180008995
FLSB01266351
287643
Bacillota
TAC
Val
>WENV180008022
FLSB01002833
287643
Bacillota
TAC
Val
>WENV180007919
FLSB01001142
287643
Bacillota
TAC
Val
>WENV180007918
FLSB01001142
287643
Bacillota
TAC
Val
>WENV180008836
FLSB01176410
452735
Bacillota
GCC
Gly
>WENV180008612
FLSB01074848
452735
Bacillota
GCC
Gly
>WENV180008213
FLSB01006115
452735
Bacillota
GCC
Gly
>WENV180008017
FLSB01002833
452735
Bacillota
GCC
Gly
>WENV180007894
FLSB01000873
452735
Bacillota
GCC
Gly
>WENV180008429
FLSB01027670
187458
Bacillota
CAT
Met
>WENV180008997
FLSB01266351
338033
Bacillota
GAA
Phe
>WENV180008924
FLSB01220863
183993
Bacillota
CAT
Met
>WENV180008427
FLSB01027670
356355
Bacillota
CAT
Met
>WENV180008425
FLSB01027670
356355
Bacillota
CAT
Met
>WENV180008923
FLSB01220863
289149
Bacillota
GGT
Thr
>WENV180008835
FLSB01175495
184495
Bacillota
CAT
Met
>WENV180008732
FLSB01116420
184495
Bacillota
CAT
Met
>WENV180008661
FLSB01090636
184495
Bacillota
CAT
Met
>WENV180007928
FLSB01001215
184495
Bacillota
CAT
Met
>WENV180009030
FLSB01284818
141202
Bacillota
CAA
Leu
>WENV180008937
FLSB01229203
141202
Bacillota
CAA
Leu
>WENV180008736
FLSB01117740
141202
Bacillota
CAA
Leu
>WENV180008638
FLSB01084175
141202
Bacillota
CAA
Leu
>WENV180008523
FLSB01050164
141202
Bacillota
CAA
Leu
>WENV180008469
FLSB01035403
141202
Bacillota
CAA
Leu
>WENV180008450
FLSB01031843
141202
Bacillota
CAA
Leu
>WENV180007933
FLSB01001270
141202
Bacillota
CAA
Leu
>WENV180007921
FLSB01001193
141202
Bacillota
CAA
Leu
>WENV180007920
FLSB01001193
141202
Bacillota
CAA
Leu
>WENV180009170
FLSB01331654
332181
Bacillota
TGT
Thr
>WENV180009167
FLSB01331654
332181
Bacillota
TGT
Thr
>WENV180008391
FLSB01024421
332181
Bacillota
TGT
Thr
>WENV180007940
FLSB01001472
47166
Bacillota
CGA
Ser
>WENV180009061
FLSB01299905
510876
Bacillota
GGT
Thr
>WENV180008451
FLSB01031958
510876
Bacillota
GGT
Thr
>WENV180008912
FLSB01214287
402739
Bacillota
CCG
Arg
>WENV180008018
FLSB01002833
289147
Bacillota
GTT
Asn
>WENV180009039
FLSB01290004
293309
Bacillota
GTT
Asn
>WENV180008389
FLSB01023900
293309
Bacillota
GTT
Asn
>WENV180009050
FLSB01295711
293309
Bacillota
GTT
Asn
>WENV180008960
FLSB01251716
289713
Bacillota
TGT
Thr
>WENV180008933
FLSB01225865
289713
Bacillota
TGT
Thr
>WENV180008364
FLSB01019320
289713
Bacillota
TGT
Thr
>WENV180007924
FLSB01001215
289713
Bacillota
TGT
Thr
>WENV180007922
FLSB01001215
289713
Bacillota
TGT
Thr
>WENV180008829
FLSB01169887
404091
Bacillota
TTG
Gln
>WENV180008789
FLSB01147468
404091
Bacillota
TTG
Gln
>WENV180008654
FLSB01088676
404091
Bacillota
TTG
Gln
>WENV180009005
FLSB01266351
110240
Bacillota
GAG
Leu
>WENV180009003
FLSB01266351
110240
Bacillota
GAG
Leu
>WENV180009001
FLSB01266351
110240
Bacillota
GAG
Leu
>WENV180008653
FLSB01088676
289716
Bacillota
GTG
His
>WENV180008788
FLSB01147468
289716
Bacillota
GTG
His
>WENV180008828
FLSB01169887
289716
Bacillota
GTG
His
>WENV180008994
FLSB01266351
287380
Bacillota
CTT
Lys
>WENV180008003
FLSB01002684
287380
Bacillota
CTT
Lys
>WENV180009190
FLSB01331813
323864
Bacillota
TGC
Ala
>WENV180009133
FLSB01327914
323864
Bacillota
TGC
Ala
>WENV180008851
FLSB01180014
432453
Bacillota
TTC
Glu
>WENV180007950
FLSB01001559
432453
Bacillota
TTC
Glu
>WENV180009165
FLSB01331654
432453
Bacillota
TTC
Glu
>WENV180009051
FLSB01295711
432453
Bacillota
TTC
Glu
>WENV180008502
FLSB01046015
480337
Bacillota
TCC
Gly
>WENV180008065
FLSB01002935
480337
Bacillota
TCC
Gly
>WENV180008318
FLSB01014736
301649
Bacillota
TTT
Lys
>WENV180008996
FLSB01266351
179935
Bacillota
GTC
Asp
>WENV180009011
FLSB01269515
119459
Bacillota
TAG
Leu
>WENV180008976
FLSB01261481
119459
Bacillota
TAG
Leu
>WENV180008592
FLSB01069928
119459
Bacillota
TAG
Leu
>WENV180007959
FLSB01001658
119459
Bacillota
TAG
Leu
>WENV180008728
FLSB01115617
333281
Bacillota
GTT
Asn
>WENV180007916
FLSB01001142
333281
Bacillota
GTT
Asn
>WENV180008766
FLSB01133400
280547
Bacillota
GTC
Asp
>WENV180008763
FLSB01131895
280547
Bacillota
GTC
Asp
>WENV180008755
FLSB01127009
280547
Bacillota
GTC
Asp
>WENV180008461
FLSB01034998
280547
Bacillota
GTC
Asp
>WENV180008410
FLSB01025831
280547
Bacillota
GTC
Asp
>WENV180008399
FLSB01025172
280547
Bacillota
GTC
Asp
>WENV180008229
FLSB01006990
280547
Bacillota
GTC
Asp
>WENV180008207
FLSB01005787
280547
Bacillota
GTC
Asp
>WENV180008005
FLSB01002717
280547
Bacillota
GTC
Asp
>WENV180007882
FLSB01000673
280547
Bacillota
GTC
Asp
>WENV180007850
FLSB01000318
280547
Bacillota
GTC
Asp
>WENV180009038
FLSB01290004
445407
Bacillota
GCC
Gly
>WENV180008442
FLSB01030022
445407
Bacillota
GCC
Gly
>WENV180008401
FLSB01025172
445407
Bacillota
GCC
Gly
>WENV180007898
FLSB01000873
289154
Bacillota
CTT
Lys
>WENV180008957
FLSB01246954
289761
Bacillota
TTT
Lys
>WENV180008790
FLSB01147468
289761
Bacillota
TTT
Lys
>WENV180008515
FLSB01048089
403759
Bacillota
CTC
Glu
>WENV180009166
FLSB01331654
289715
Bacillota
TAC
Val
>WENV180009158
FLSB01330959
289715
Bacillota
TAC
Val
>WENV180009052
FLSB01295711
289715
Bacillota
TAC
Val
>WENV180008852
FLSB01180014
289715
Bacillota
TAC
Val
>WENV180008830
FLSB01171827
289715
Bacillota
TAC
Val
>WENV180008808
FLSB01160558
289715
Bacillota
TAC
Val
>WENV180008756
FLSB01127084
289715
Bacillota
TAC
Val
>WENV180008279
FLSB01011201
289715
Bacillota
TAC
Val
>WENV180008259
FLSB01009135
289715
Bacillota
TAC
Val
>WENV180007951
FLSB01001559
289715
Bacillota
TAC
Val
>WENV180009184
FLSB01331784
20943
Bacillota
CGA
Ser
>WENV180008916
FLSB01218061
20943
Bacillota
CGA
Ser
>WENV180008895
FLSB01206912
20943
Bacillota
CGA
Ser
>WENV180008724
FLSB01113910
20943
Bacillota
CGA
Ser
>WENV180007905
FLSB01001016
20943
Bacillota
CGA
Ser
>WENV180008428
FLSB01027670
289123
Bacillota
GGT
Thr
>WENV180009015
FLSB01270703
208539
Bacillota
TGG
Pro
>WENV180008064
FLSB01002935
208539
Bacillota
TGG
Pro
>WENV180007873
FLSB01000506
208539
Bacillota
TGG
Pro
>WENV180008936
FLSB01228936
184539
Bacillota
TCT
Arg
>WENV180008503
FLSB01046015
184539
Bacillota
TCT
Arg
>WENV180008337
FLSB01016624
184539
Bacillota
TCT
Arg
>WENV180007846
FLSB01000303
184539
Bacillota
TCT
Arg
>WENV180008066
FLSB01002935
184539
Bacillota
TCT
Arg
>WENV180008180
FLSB01004606
184539
Bacillota
TCT
Arg
>WENV180008238
FLSB01008126
184539
Bacillota
TCT
Arg
>WENV180008316
FLSB01014717
184539
Bacillota
TCT
Arg
>WENV180008959
FLSB01251459
183995
Bacillota
GGG
Pro
>WENV180007986
FLSB01002136
183995
Bacillota
GGG
Pro
>WENV180009004
FLSB01266351
100945
Bacillota
CAG
Leu
>WENV180009002
FLSB01266351
100945
Bacillota
CAG
Leu
>WENV180008357
FLSB01018526
403766
Bacillota
TTG
Gln
>WENV180008214
FLSB01006115
489283
Bacillota
GCA
Cys
>WENV180007895
FLSB01000873
489283
Bacillota
GCA
Cys
>WENV180009017
FLSB01273352
289124
Bacillota
GTT
Asn
>WENV180008820
FLSB01165686
289124
Bacillota
GTT
Asn
>WENV180007807
FLSB01000051
284680
Bacillota
TTT
Lys
>WENV180007903
FLSB01001008
178610
Bacillota
GTT
Asn
>WENV180008473
FLSB01035989
482078
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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