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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
90 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180010261
FLSC01445857
288834
Bacillota
TAC
Val
>WENV180010187
FLSC01383465
283303
Bacillota
GTC
Asp
>WENV180010267
FLSC01445857
212982
Bacillota
ACG
Arg
>WENV180009647
FLSC01036543
184537
Bacillota
ACG
Arg
>WENV180009655
FLSC01039883
184537
Bacillota
ACG
Arg
>WENV180009978
FLSC01208851
184537
Bacillota
ACG
Arg
>WENV180010183
FLSC01383126
184537
Bacillota
ACG
Arg
>WENV180010365
FLSC01482845
408526
Bacillota
GCA
Cys
>WENV180010095
FLSC01299040
296855
Bacillota
GGT
Thr
>WENV180009912
FLSC01157864
48505
Bacillota
TGA
Ser
>WENV180009804
FLSC01092926
48505
Bacillota
TGA
Ser
>WENV180009790
FLSC01086495
48505
Bacillota
TGA
Ser
>WENV180009768
FLSC01077441
48505
Bacillota
TGA
Ser
>WENV180009593
FLSC01020876
48505
Bacillota
TGA
Ser
>WENV180009265
FLSC01000260
48505
Bacillota
TGA
Ser
>WENV180009981
FLSC01209170
231532
Bacillota
ACG
Arg
>WENV180009693
FLSC01048395
289717
Bacillota
CTT
Lys
>WENV180009363
FLSC01001941
289717
Bacillota
CTT
Lys
>WENV180010109
FLSC01307366
405874
Bacillota
TTC
Glu
>WENV180009967
FLSC01201198
20932
Bacillota
GCT
Ser
>WENV180009766
FLSC01077114
20932
Bacillota
GCT
Ser
>WENV180009308
FLSC01000715
20932
Bacillota
GCT
Ser
>WENV180010363
FLSC01482845
291553
Bacillota
GAA
Phe
>WENV180009679
FLSC01045035
283622
Bacillota
CTT
Lys
>WENV180009550
FLSC01011799
482593
Bacillota
CCC
Gly
>WENV180009373
FLSC01002132
339995
Bacillota
TGC
Ala
>WENV180009348
FLSC01001649
20942
Bacillota
GGA
Ser
>WENV180009326
FLSC01001091
20942
Bacillota
GGA
Ser
>WENV180009311
FLSC01000720
20942
Bacillota
GGA
Ser
>WENV180010110
FLSC01307366
287643
Bacillota
TAC
Val
>WENV180010149
FLSC01342761
452735
Bacillota
GCC
Gly
>WENV180010156
FLSC01355599
453914
Bacillota
GTT
Asn
>WENV180010163
FLSC01360649
184495
Bacillota
CAT
Met
>WENV180010096
FLSC01299040
184495
Bacillota
CAT
Met
>WENV180009866
FLSC01132630
184495
Bacillota
CAT
Met
>WENV180009802
FLSC01092171
184495
Bacillota
CAT
Met
>WENV180009339
FLSC01001361
184495
Bacillota
CAT
Met
>WENV180010015
FLSC01226853
141202
Bacillota
CAA
Leu
>WENV180010314
FLSC01474906
141202
Bacillota
CAA
Leu
>WENV180010317
FLSC01477241
332181
Bacillota
TGT
Thr
>WENV180009583
FLSC01017831
47166
Bacillota
CGA
Ser
>WENV180009538
FLSC01010060
293309
Bacillota
GTT
Asn
>WENV180009368
FLSC01002021
404091
Bacillota
TTG
Gln
>WENV180009367
FLSC01002021
289716
Bacillota
GTG
His
>WENV180009823
FLSC01107915
289716
Bacillota
GTG
His
>WENV180009917
FLSC01162838
289716
Bacillota
GTG
His
>WENV180010265
FLSC01445857
455891
Bacillota
GCC
Gly
>WENV180010041
FLSC01247531
323864
Bacillota
TGC
Ala
>WENV180010116
FLSC01311188
432453
Bacillota
TTC
Glu
>WENV180009896
FLSC01148729
432453
Bacillota
TTC
Glu
>WENV180009869
FLSC01134499
432453
Bacillota
TTC
Glu
>WENV180009651
FLSC01037365
432453
Bacillota
TTC
Glu
>WENV180010263
FLSC01445857
301649
Bacillota
TTT
Lys
>WENV180009784
FLSC01083622
119459
Bacillota
TAG
Leu
>WENV180009849
FLSC01124850
119459
Bacillota
TAG
Leu
>WENV180009751
FLSC01070102
333281
Bacillota
GTT
Asn
>WENV180010115
FLSC01311188
333281
Bacillota
GTT
Asn
>WENV180009929
FLSC01176835
280547
Bacillota
GTC
Asp
>WENV180009961
FLSC01199530
280547
Bacillota
GTC
Asp
>WENV180010019
FLSC01234270
280547
Bacillota
GTC
Asp
>WENV180010362
FLSC01482845
280547
Bacillota
GTC
Asp
>WENV180009508
FLSC01007561
445407
Bacillota
GCC
Gly
>WENV180009938
FLSC01183471
445407
Bacillota
GCC
Gly
>WENV180010364
FLSC01482845
445407
Bacillota
GCC
Gly
>WENV180009324
FLSC01001024
289154
Bacillota
CTT
Lys
>WENV180009369
FLSC01002021
289761
Bacillota
TTT
Lys
>WENV180009522
FLSC01008849
235661
Bacillota
GTC
Asp
>WENV180010158
FLSC01355599
280561
Bacillota
CAT
Met
>WENV180010200
FLSC01398361
289715
Bacillota
TAC
Val
>WENV180010117
FLSC01311188
289715
Bacillota
TAC
Val
>WENV180009936
FLSC01181582
289715
Bacillota
TAC
Val
>WENV180009897
FLSC01148729
289715
Bacillota
TAC
Val
>WENV180009785
FLSC01083719
289715
Bacillota
TAC
Val
>WENV180009652
FLSC01037365
289715
Bacillota
TAC
Val
>WENV180009566
FLSC01015167
289715
Bacillota
TAC
Val
>WENV180009988
FLSC01213697
20943
Bacillota
CGA
Ser
>WENV180009894
FLSC01148344
20943
Bacillota
CGA
Ser
>WENV180009856
FLSC01128125
20943
Bacillota
CGA
Ser
>WENV180009694
FLSC01049328
20943
Bacillota
CGA
Ser
>WENV180009354
FLSC01001828
20943
Bacillota
CGA
Ser
>WENV180009273
FLSC01000342
20943
Bacillota
CGA
Ser
>WENV180009256
FLSC01000097
20943
Bacillota
CGA
Ser
>WENV180009714
FLSC01056273
184539
Bacillota
TCT
Arg
>WENV180009594
FLSC01021454
184539
Bacillota
TCT
Arg
>WENV180009543
FLSC01010803
184539
Bacillota
TCT
Arg
>WENV180009931
FLSC01177020
183995
Bacillota
GGG
Pro
>WENV180009964
FLSC01200201
403766
Bacillota
TTG
Gln
>WENV180010082
FLSC01284960
178610
Bacillota
GTT
Asn
>WENV180009825
FLSC01108962
178610
Bacillota
GTT
Asn
>WENV180010323
FLSC01479732
482078
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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