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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180011216
FLSK01000009
284889
Actinobacteria
CTC
Glu
>WENV180011248
FLSK01000316
371116
Actinobacteria
GGC
Ala
>WENV180011405
FLSK01003017
47453
Actinobacteria
GAG
Leu
>WENV180011517
FLSK01003400
284890
Actinobacteria
CTT
Lys
>WENV180011518
FLSK01003400
284887
Actinobacteria
GCC
Gly
>WENV180011520
FLSK01003400
284889
Actinobacteria
CTC
Glu
>WENV180011570
FLSK01005437
290430
Actinobacteria
TCT
Arg
>WENV180011605
FLSK01007908
284887
Actinobacteria
GCC
Gly
>WENV180011678
FLSK01019699
184065
Actinobacteria
TGG
Pro
>WENV180011699
FLSK01024312
284887
Actinobacteria
GCC
Gly
>WENV180011703
FLSK01025253
284887
Actinobacteria
GCC
Gly
>WENV180011796
FLSK01048527
185117
Actinobacteria
TAA
Leu
>WENV180011887
FLSK01079825
371116
Actinobacteria
GGC
Ala
>WENV180011901
FLSK01085311
187640
Actinobacteria
TGT
Thr
>WENV180011935
FLSK01099055
184065
Actinobacteria
TGG
Pro
>WENV180012015
FLSK01130733
284889
Actinobacteria
CTC
Glu
>WENV180012033
FLSK01140518
241571
Actinobacteria
CAT
Met
>WENV180012069
FLSK01159288
284890
Actinobacteria
CTT
Lys
>WENV180012151
FLSK01217692
371116
Actinobacteria
GGC
Ala
>WENV180012163
FLSK01222384
293249
Actinobacteria
CAC
Val
>WENV180012228
FLSK01281190
290430
Actinobacteria
TCT
Arg
>WENV180012237
FLSK01287009
281155
Actinobacteria
CGT
Thr
>WENV180012267
FLSK01315776
184065
Actinobacteria
TGG
Pro
>WENV180012278
FLSK01321969
284890
Actinobacteria
CTT
Lys
>WENV180012293
FLSK01335707
284890
Actinobacteria
CTT
Lys
>WENV180012370
FLSK01376791
284890
Actinobacteria
CTT
Lys
>WENV180012389
FLSK01376860
187640
Actinobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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