This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180011726
FLSK01028760
184537
Firmicutes
ACG
Arg
>WENV180011768
FLSK01041779
184537
Firmicutes
ACG
Arg
>WENV180011657
FLSK01015353
141202
Firmicutes
CAA
Leu
>WENV180012277
FLSK01321886
141202
Firmicutes
CAA
Leu
>WENV180012378
FLSK01376819
141202
Firmicutes
CAA
Leu
>WENV180012086
FLSK01166942
184495
Firmicutes
CAT
Met
>WENV180012078
FLSK01164271
280644
Firmicutes
CCA
Trp
>WENV180011277
FLSK01000905
482593
Firmicutes
CCC
Gly
>WENV180011278
FLSK01000905
482593
Firmicutes
CCC
Gly
>WENV180011842
FLSK01060272
482593
Firmicutes
CCC
Gly
>WENV180011249
FLSK01000342
20943
Firmicutes
CGA
Ser
>WENV180011630
FLSK01010399
20943
Firmicutes
CGA
Ser
>WENV180011342
FLSK01001550
289717
Firmicutes
CTT
Lys
>WENV180011533
FLSK01003556
289717
Firmicutes
CTT
Lys
>WENV180012275
FLSK01321202
289717
Firmicutes
CTT
Lys
>WENV180012366
FLSK01376754
289717
Firmicutes
CTT
Lys
>WENV180012325
FLSK01371277
283622
Firmicutes
CTT
Lys
>WENV180011228
FLSK01000091
291553
Firmicutes
GAA
Phe
>WENV180011991
FLSK01121828
291553
Firmicutes
GAA
Phe
>WENV180012363
FLSK01376731
291553
Firmicutes
GAA
Phe
>WENV180011649
FLSK01013949
408526
Firmicutes
GCA
Cys
>WENV180011993
FLSK01121828
408526
Firmicutes
GCA
Cys
>WENV180011648
FLSK01013949
445407
Firmicutes
GCC
Gly
>WENV180011937
FLSK01100721
445407
Firmicutes
GCC
Gly
>WENV180011992
FLSK01121828
445407
Firmicutes
GCC
Gly
>WENV180011250
FLSK01000349
20932
Firmicutes
GCT
Ser
>WENV180011844
FLSK01060713
20932
Firmicutes
GCT
Ser
>WENV180012343
FLSK01376483
20932
Firmicutes
GCT
Ser
>WENV180011361
FLSK01002166
20942
Firmicutes
GGA
Ser
>WENV180011779
FLSK01042966
20942
Firmicutes
GGA
Ser
>WENV180012085
FLSK01166942
296855
Firmicutes
GGT
Thr
>WENV180011879
FLSK01076321
141141
Firmicutes
GTA
Tyr
>WENV180011981
FLSK01119830
141141
Firmicutes
GTA
Tyr
>WENV180011876
FLSK01076321
283303
Firmicutes
GTC
Asp
>WENV180011978
FLSK01119830
283303
Firmicutes
GTC
Asp
>WENV180011227
FLSK01000091
280547
Firmicutes
GTC
Asp
>WENV180011652
FLSK01014426
280547
Firmicutes
GTC
Asp
>WENV180011673
FLSK01018235
280547
Firmicutes
GTC
Asp
>WENV180011969
FLSK01118010
280547
Firmicutes
GTC
Asp
>WENV180011990
FLSK01121828
280547
Firmicutes
GTC
Asp
>WENV180012362
FLSK01376731
280547
Firmicutes
GTC
Asp
>WENV180011907
FLSK01087902
289716
Firmicutes
GTG
His
>WENV180011888
FLSK01081001
453914
Firmicutes
GTT
Asn
>WENV180011235
FLSK01000156
289715
Firmicutes
TAC
Val
>WENV180011313
FLSK01001344
289715
Firmicutes
TAC
Val
>WENV180011883
FLSK01077650
289715
Firmicutes
TAC
Val
>WENV180011268
FLSK01000567
119459
Firmicutes
TAG
Leu
>WENV180011355
FLSK01001999
119459
Firmicutes
TAG
Leu
>WENV180011356
FLSK01001999
119459
Firmicutes
TAG
Leu
>WENV180011554
FLSK01004333
119459
Firmicutes
TAG
Leu
>WENV180011258
FLSK01000410
183748
Firmicutes
TCT
Arg
>WENV180011653
FLSK01014628
183748
Firmicutes
TCT
Arg
>WENV180011244
FLSK01000241
48505
Firmicutes
TGA
Ser
>WENV180011296
FLSK01001162
48505
Firmicutes
TGA
Ser
>WENV180012159
FLSK01221221
48505
Firmicutes
TGA
Ser
>WENV180011922
FLSK01094423
208539
Firmicutes
TGG
Pro
>WENV180012028
FLSK01136557
332181
Firmicutes
TGT
Thr
>WENV180012082
FLSK01166942
289713
Firmicutes
TGT
Thr
>WENV180011908
FLSK01087902
404091
Firmicutes
TTG
Gln
>WENV180011909
FLSK01087902
289761
Firmicutes
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK