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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180011215
FLSK01000008
99921
Gammaproteobacteria
GAG
Leu
>WENV180011298
FLSK01001206
31109
Gammaproteobacteria
GGA
Ser
>WENV180011335
FLSK01001502
31109
Gammaproteobacteria
GGA
Ser
>WENV180011419
FLSK01003029
178083
Gammaproteobacteria
GAC
Val
>WENV180011441
FLSK01003053
29720
Gammaproteobacteria
GGA
Ser
>WENV180011446
FLSK01003058
281181
Gammaproteobacteria
CAT
Met
>WENV180011447
FLSK01003058
3992
Gammaproteobacteria
GCT
Ser
>WENV180011467
FLSK01003099
176541
Gammaproteobacteria
CAT
Met
>WENV180011469
FLSK01003099
401175
Gammaproteobacteria
TTG
Gln
>WENV180011470
FLSK01003099
401175
Gammaproteobacteria
TTG
Gln
>WENV180011476
FLSK01003113
73129
Gammaproteobacteria
TAA
Leu
>WENV180011538
FLSK01003714
73129
Gammaproteobacteria
TAA
Leu
>WENV180011557
FLSK01004452
109178
Gammaproteobacteria
CAA
Leu
>WENV180011574
FLSK01005655
73129
Gammaproteobacteria
TAA
Leu
>WENV180011628
FLSK01010073
401175
Gammaproteobacteria
TTG
Gln
>WENV180011743
FLSK01036564
109178
Gammaproteobacteria
CAA
Leu
>WENV180011852
FLSK01066426
31109
Gammaproteobacteria
GGA
Ser
>WENV180011999
FLSK01123412
401175
Gammaproteobacteria
TTG
Gln
>WENV180012156
FLSK01219166
4023
Gammaproteobacteria
>WENV180012225
FLSK01279414
31109
Gammaproteobacteria
GGA
Ser
>WENV180012253
FLSK01299866
4023
Gammaproteobacteria
>WENV180012281
FLSK01322914
31109
Gammaproteobacteria
GGA
Ser
>WENV180012351
FLSK01376552
31109
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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