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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170575969
FPHW01000016
311084
Gammaproteobacteria
GCC
Gly
>WENV170575970
FPHW01000016
480629
Gammaproteobacteria
GCA
Cys
>WENV170575978
FPHW01000126
291796
Gammaproteobacteria
GGC
Ala
>WENV170575987
FPHW01000160
281418
Gammaproteobacteria
TGC
Ala
>WENV170575986
FPHW01000160
176301
Gammaproteobacteria
GAT
Ile
>WENV170575989
FPHW01000171
311084
Gammaproteobacteria
GCC
Gly
>WENV170575990
FPHW01000171
480629
Gammaproteobacteria
GCA
Cys
>WENV170575993
FPHW01000205
311084
Gammaproteobacteria
GCC
Gly
>WENV170575996
FPHW01000209
405482
Gammaproteobacteria
TTG
Gln
>WENV170575998
FPHW01000243
291796
Gammaproteobacteria
GGC
Ala
>WENV170576001
FPHW01000249
340790
Gammaproteobacteria
TGT
Thr
>WENV170576002
FPHW01000250
405482
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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