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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180016780
FSVW01001897
283003
Betaproteobacteria
CCG
Arg
>WENV180016736
FSVW01000693
281431
Betaproteobacteria
GTT
Asn
>WENV180016742
FSVW01000833
281431
Betaproteobacteria
GTT
Asn
>WENV180016802
FSVW01002659
281431
Betaproteobacteria
GTT
Asn
>WENV180016807
FSVW01002745
281431
Betaproteobacteria
GTT
Asn
>WENV180016762
FSVW01001175
210127
Betaproteobacteria
ACG
Arg
>WENV180016774
FSVW01001838
210127
Betaproteobacteria
ACG
Arg
>WENV180016829
FSVW01003750
210127
Betaproteobacteria
ACG
Arg
>WENV180016810
FSVW01002886
100103
Betaproteobacteria
GTA
Tyr
>WENV180016766
FSVW01001355
481266
Betaproteobacteria
GCA
Cys
>WENV180016797
FSVW01002296
198132
Betaproteobacteria
CAT
Met
>WENV180016717
FSVW01000085
198132
Betaproteobacteria
CAT
Met
>WENV180016720
FSVW01000251
118157
Betaproteobacteria
GAG
Leu
>WENV180016814
FSVW01003079
118157
Betaproteobacteria
GAG
Leu
>WENV180016822
FSVW01003506
178096
Betaproteobacteria
TCT
Arg
>WENV180016737
FSVW01000725
178096
Betaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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