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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180035115
FTKT01002352
283940
Betaproteobacteria
TTC
Glu
>WENV180035116
FTKT01002352
283940
Betaproteobacteria
TTC
Glu
>WENV180035117
FTKT01002352
283940
Betaproteobacteria
TTC
Glu
>WENV180035327
FTKT01203815
283940
Betaproteobacteria
TTC
Glu
>WENV180035329
FTKT01203815
283940
Betaproteobacteria
TTC
Glu
>WENV180035029
FTKT01000274
290590
Betaproteobacteria
TAC
Val
>WENV180035097
FTKT01001686
464758
Betaproteobacteria
GGT
Thr
>WENV180035318
FTKT01179616
8690
Betaproteobacteria
GCT
Ser
>WENV180035107
FTKT01002052
333120
Betaproteobacteria
CCA
Trp
>WENV180035133
FTKT01002584
185257
Betaproteobacteria
CAT
Met
>WENV180035164
FTKT01003202
185257
Betaproteobacteria
CAT
Met
>WENV180035096
FTKT01001613
118123
Betaproteobacteria
CAG
Leu
>WENV180035147
FTKT01002860
118123
Betaproteobacteria
CAG
Leu
>WENV180035142
FTKT01002765
467771
Betaproteobacteria
GGT
Thr
>WENV180035140
FTKT01002765
100103
Betaproteobacteria
GTA
Tyr
>WENV180035298
FTKT01106981
100103
Betaproteobacteria
GTA
Tyr
>WENV180035078
FTKT01000907
73884
Betaproteobacteria
TAA
Leu
>WENV180035042
FTKT01000355
56360
Betaproteobacteria
CGA
Ser
>WENV180035198
FTKT01005402
56360
Betaproteobacteria
CGA
Ser
>WENV180035266
FTKT01057471
284936
Betaproteobacteria
CGT
Thr
>WENV180035104
FTKT01001875
198132
Betaproteobacteria
CAT
Met
>WENV180035128
FTKT01002483
198132
Betaproteobacteria
CAT
Met
>WENV180035150
FTKT01002925
198132
Betaproteobacteria
CAT
Met
>WENV180035248
FTKT01034374
198132
Betaproteobacteria
CAT
Met
>WENV180035251
FTKT01035302
198132
Betaproteobacteria
CAT
Met
>WENV180035287
FTKT01079037
299575
Betaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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