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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170634450
FYBJ01001402
331330
Gammaproteobacteria
TAC
Val
>WENV170634276
FYBJ01000077
73044
Gammaproteobacteria
CAG
Leu
>WENV170634267
FYBJ01000047
480653
Gammaproteobacteria
GCA
Cys
>WENV170634569
FYBJ01002183
56093
Gammaproteobacteria
GGA
Ser
>WENV170634443
FYBJ01001397
483085
Gammaproteobacteria
GCA
Cys
>WENV170634573
FYBJ01002187
280694
Gammaproteobacteria
GTG
His
>WENV170634467
FYBJ01001408
282413
Gammaproteobacteria
GTT
Asn
>WENV170634327
FYBJ01000182
299855
Gammaproteobacteria
TAC
Val
>WENV170634329
FYBJ01000182
299855
Gammaproteobacteria
TAC
Val
>WENV170634358
FYBJ01000338
316465
Gammaproteobacteria
CAT
Met
>WENV170634258
FYBJ01000032
176065
Gammaproteobacteria
CCT
Arg
>WENV170634309
FYBJ01000115
302111
Gammaproteobacteria
GTT
Asn
>WENV170634457
FYBJ01001404
280699
Gammaproteobacteria
GGT
Thr
>WENV170634571
FYBJ01002187
242775
Gammaproteobacteria
TGG
Pro
>WENV170634275
FYBJ01000068
398943
Gammaproteobacteria
GAC
Val
>WENV170634468
FYBJ01001409
73043
Gammaproteobacteria
CAA
Leu
>WENV170634572
FYBJ01002187
179187
Gammaproteobacteria
TCT
Arg
>WENV170634454
FYBJ01001404
280696
Gammaproteobacteria
TGT
Thr
>WENV170634314
FYBJ01000157
57209
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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