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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170704776
LLEM01011408
316553
Gammaproteobacteria
>WENV170704702
LLEM01000175
280810
Gammaproteobacteria
GTG
His
>WENV170704704
LLEM01000175
280810
Gammaproteobacteria
GTG
His
>WENV170704713
LLEM01000340
502867
Gammaproteobacteria
GCA
Cys
>WENV170704767
LLEM01008112
399015
Gammaproteobacteria
>WENV170704698
LLEM01000093
500085
Gammaproteobacteria
GCA
Cys
>WENV170704731
LLEM01001311
500085
Gammaproteobacteria
GCA
Cys
>WENV170704728
LLEM01001010
282682
Gammaproteobacteria
GTT
Asn
>WENV170704766
LLEM01008112
134404
Gammaproteobacteria
TAG
Leu
>WENV170704694
LLEM01000059
60942
Gammaproteobacteria
GGA
Ser
>WENV170704717
LLEM01000471
60942
Gammaproteobacteria
GGA
Ser
>WENV170704711
LLEM01000316
210138
Gammaproteobacteria
TCT
Arg
>WENV170704699
LLEM01000115
184288
Gammaproteobacteria
TCT
Arg
>WENV170704693
LLEM01000054
178434
Gammaproteobacteria
GAC
Val
>WENV170704723
LLEM01000887
303413
Gammaproteobacteria
GGT
Thr
>WENV170704774
LLEM01011252
118082
Gammaproteobacteria
TAA
Leu
>WENV170704687
LLEM01000011
282683
Gammaproteobacteria
GGC
Ala
>WENV170704773
LLEM01011039
282683
Gammaproteobacteria
GGC
Ala
>WENV170704745
LLEM01002631
362004
Gammaproteobacteria
TGT
Thr
>WENV170704738
LLEM01002160
362004
Gammaproteobacteria
TGT
Thr
>WENV170704695
LLEM01000064
197991
Gammaproteobacteria
ACG
Arg
>WENV170704742
LLEM01002419
32355
Gammaproteobacteria
GGA
Ser
>WENV170704733
LLEM01001366
331709
Gammaproteobacteria
GCC
Gly
>WENV170704710
LLEM01000316
178009
Gammaproteobacteria
TGG
Pro
>WENV170704708
LLEM01000316
178009
Gammaproteobacteria
TGG
Pro
>WENV170704727
LLEM01000918
335190
Gammaproteobacteria
TTT
Lys
>WENV170704726
LLEM01000918
335190
Gammaproteobacteria
TTT
Lys
>WENV170704725
LLEM01000918
335190
Gammaproteobacteria
TTT
Lys
>WENV170704729
LLEM01001052
176256
Gammaproteobacteria
GAT
Ile
>WENV170704736
LLEM01001868
285826
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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