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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170742268
LULU01007705
400848
Alphaproteobacteria
GAC
Val
>WENV170742324
LULU01010775
481048
Alphaproteobacteria
GCA
Cys
>WENV170742176
LULU01003119
140876
Alphaproteobacteria
>WENV170742363
LULU01013825
400387
Alphaproteobacteria
GGT
Thr
>WENV170742400
LULU01017196
481073
Alphaproteobacteria
CTG
Gln
>WENV170742603
LULU01044432
180029
Alphaproteobacteria
CAT
Met
>WENV170742511
LULU01029528
29702
Alphaproteobacteria
GGA
Ser
>WENV170742630
LULU01048910
340918
Alphaproteobacteria
CGT
Thr
>WENV170742142
LULU01002114
481074
Alphaproteobacteria
TCC
Gly
>WENV170742412
LULU01018762
118247
Alphaproteobacteria
CAA
Leu
>WENV170742350
LULU01012968
29701
Alphaproteobacteria
CGA
Ser
>WENV170742358
LULU01013573
400419
Alphaproteobacteria
TTG
Gln
>WENV170742132
LULU01001790
29655
Alphaproteobacteria
TGA
Ser
>WENV170742107
LULU01001112
286018
Alphaproteobacteria
CCA
Trp
>WENV170742281
LULU01008598
29815
Alphaproteobacteria
TGA
Ser
>WENV170742571
LULU01040246
422170
Alphaproteobacteria
GGT
Thr
>WENV170742419
LULU01019571
121990
Alphaproteobacteria
TAG
Leu
>WENV170742343
LULU01012491
428327
Alphaproteobacteria
GCC
Gly
>WENV170742192
LULU01003540
178576
Alphaproteobacteria
ACG
Arg
>WENV170742351
LULU01013090
118150
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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