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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170774822
LXNJ01066499
487002
Gammaproteobacteria
GCA
Cys
>WENV170772983
LXNJ01001206
200642
Gammaproteobacteria
CCG
Arg
>WENV170772756
LXNJ01000437
480941
Gammaproteobacteria
TCC
Gly
>WENV170772970
LXNJ01001146
480941
Gammaproteobacteria
TCC
Gly
>WENV170773688
LXNJ01010672
178164
Gammaproteobacteria
GAT
Ile
>WENV170773934
LXNJ01016607
313852
Gammaproteobacteria
TTC
Glu
>WENV170774453
LXNJ01041268
292006
Gammaproteobacteria
TGC
Ala
>WENV170773142
LXNJ01002331
480371
Gammaproteobacteria
GCA
Cys
>WENV170773551
LXNJ01008105
292174
Gammaproteobacteria
GAA
Phe
>WENV170774057
LXNJ01021215
292174
Gammaproteobacteria
GAA
Phe
>WENV170773769
LXNJ01012344
281418
Gammaproteobacteria
TGC
Ala
>WENV170774414
LXNJ01038483
176301
Gammaproteobacteria
GAT
Ile
>WENV170774388
LXNJ01036787
176301
Gammaproteobacteria
GAT
Ile
>WENV170773768
LXNJ01012344
176301
Gammaproteobacteria
GAT
Ile
>WENV170772853
LXNJ01000718
119044
Gammaproteobacteria
GTA
Tyr
>WENV170772969
LXNJ01001146
119044
Gammaproteobacteria
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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