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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170784449
MCND01000092
73113
Gammaproteobacteria
TAA
Leu
>WENV170784454
MCND01000124
176628
Gammaproteobacteria
GGG
Pro
>WENV170784451
MCND01000107
281229
Gammaproteobacteria
GTT
Asn
>WENV170784438
MCND01000020
29449
Gammaproteobacteria
CGA
Ser
>WENV170784448
MCND01000067
73114
Gammaproteobacteria
CAG
Leu
>WENV170784470
MCND01000307
176631
Gammaproteobacteria
CCT
Arg
>WENV170784467
MCND01000287
176627
Gammaproteobacteria
CCG
Arg
>WENV170784437
MCND01000020
480506
Gammaproteobacteria
CCC
Gly
>WENV170784439
MCND01000025
283441
Gammaproteobacteria
>WENV170784441
MCND01000025
283441
Gammaproteobacteria
>WENV170784464
MCND01000227
56419
Gammaproteobacteria
TGA
Ser
>WENV170784457
MCND01000143
117879
Gammaproteobacteria
TAG
Leu
>WENV170784434
MCND01000001
117930
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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