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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170818273
MDSX01067508
336000
Bacteroidetes
CAT
Met
>WENV170819886
MDSX01101259
176557
Bacteroidetes
CAT
Met
>WENV170814870
MDSX01000654
179598
Bacteroidetes
CAT
Met
>WENV170819825
MDSX01099996
296664
Bacteroidetes
GAA
Phe
>WENV170815556
MDSX01012253
156605
Bacteroidetes
GAC
Val
>WENV170816757
MDSX01036594
156605
Bacteroidetes
GAC
Val
>WENV170817216
MDSX01045934
156605
Bacteroidetes
GAC
Val
>WENV170817866
MDSX01058602
156605
Bacteroidetes
GAC
Val
>WENV170818673
MDSX01076518
156605
Bacteroidetes
GAC
Val
>WENV170818843
MDSX01080357
156605
Bacteroidetes
GAC
Val
>WENV170819394
MDSX01091625
156605
Bacteroidetes
GAC
Val
>WENV170819635
MDSX01096462
156605
Bacteroidetes
GAC
Val
>WENV170816447
MDSX01030602
140868
Bacteroidetes
GTA
Tyr
>WENV170815406
MDSX01009536
197494
Bacteroidetes
GTC
Asp
>WENV170817451
MDSX01050600
181598
Bacteroidetes
GTT
Asn
>WENV170819121
MDSX01086040
181598
Bacteroidetes
GTT
Asn
>WENV170819259
MDSX01089112
181598
Bacteroidetes
GTT
Asn
>WENV170815340
MDSX01008388
176812
Bacteroidetes
TCT
Arg
>WENV170815341
MDSX01008388
176812
Bacteroidetes
TCT
Arg
>WENV170815986
MDSX01021356
176812
Bacteroidetes
TCT
Arg
>WENV170817458
MDSX01050770
176812
Bacteroidetes
TCT
Arg
>WENV170819832
MDSX01100184
285360
Bacteroidetes
TTT
Lys
>WENV170819385
MDSX01091359
287319
Bacteroidetes
TTT
Lys
>WENV170815453
MDSX01010481
286857
Bacteroidetes
TTT
Lys
>WENV170817092
MDSX01043595
286857
Bacteroidetes
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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