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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170825533
MDSY01094594
181905
Actinomycetota
CAT
Met
>WENV170820961
MDSY01014073
177601
Actinomycetota
CAT
Met
>WENV170824838
MDSY01083160
286772
Actinomycetota
TTC
Glu
>WENV170827456
MDSY01129406
286772
Actinomycetota
TTC
Glu
>WENV170821640
MDSY01025308
286398
Actinomycetota
GTT
Asn
>WENV170824148
MDSY01070326
286398
Actinomycetota
GTT
Asn
>WENV170822975
MDSY01049539
399484
Actinomycetota
GCC
Gly
>WENV170827604
MDSY01132623
180471
Actinomycetota
CAT
Met
>WENV170820430
MDSY01004626
281633
Actinomycetota
CCA
Trp
>WENV170820572
MDSY01006932
281633
Actinomycetota
CCA
Trp
>WENV170823198
MDSY01053505
281633
Actinomycetota
CCA
Trp
>WENV170824039
MDSY01068994
281633
Actinomycetota
CCA
Trp
>WENV170824285
MDSY01073072
281633
Actinomycetota
CCA
Trp
>WENV170826820
MDSY01117452
287024
Actinomycetota
GTT
Asn
>WENV170824577
MDSY01078333
30248
Actinomycetota
CGA
Ser
>WENV170822006
MDSY01032329
285876
Actinomycetota
CGT
Thr
>WENV170823435
MDSY01057544
286628
Actinomycetota
GTG
His
>WENV170822326
MDSY01038225
286483
Actinomycetota
>WENV170820911
MDSY01013637
282997
Actinomycetota
TTT
Lys
>WENV170827634
MDSY01133274
56361
Actinomycetota
GGA
Ser
>WENV170825967
MDSY01102839
286927
Actinomycetota
TCT
Arg
>WENV170824499
MDSY01077183
56310
Actinomycetota
GGA
Ser
>WENV170820722
MDSY01009359
118178
Actinomycetota
GTA
Tyr
>WENV170824093
MDSY01069458
118175
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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