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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170844373
MDTA01005127
181598
Bacteroidetes
GTT
Asn
>WENV170845093
MDTA01017806
181598
Bacteroidetes
GTT
Asn
>WENV170845162
MDTA01018964
176812
Bacteroidetes
TCT
Arg
>WENV170845573
MDTA01026422
156605
Bacteroidetes
GAC
Val
>WENV170845779
MDTA01030405
286857
Bacteroidetes
TTT
Lys
>WENV170846637
MDTA01046059
156605
Bacteroidetes
GAC
Val
>WENV170846854
MDTA01049852
181598
Bacteroidetes
GTT
Asn
>WENV170848016
MDTA01071720
179598
Bacteroidetes
CAT
Met
>WENV170849697
MDTA01100570
121312
Bacteroidetes
TAG
Leu
>WENV170850257
MDTA01111036
121312
Bacteroidetes
TAG
Leu
>WENV170850422
MDTA01113785
305664
Bacteroidetes
CAT
Met
>WENV170850484
MDTA01114966
176812
Bacteroidetes
TCT
Arg
>WENV170851340
MDTA01130357
179905
Bacteroidetes
GTT
Asn
>WENV170851389
MDTA01131253
176812
Bacteroidetes
TCT
Arg
>WENV170851672
MDTA01135880
176812
Bacteroidetes
TCT
Arg
>WENV170852373
MDTA01149076
286857
Bacteroidetes
TTT
Lys
>WENV170852582
MDTA01153251
401036
Bacteroidetes
CCT
Arg
>WENV170853294
MDTA01166589
181598
Bacteroidetes
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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