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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
155 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170850473
MDTA01114661
299323
Cyanobacteria
CAT
Met
>WENV170855533
MDTA01207506
299323
Cyanobacteria
CAT
Met
>WENV170847854
MDTA01069045
208578
Cyanobacteria
CGG
Pro
>WENV170849801
MDTA01102534
208578
Cyanobacteria
CGG
Pro
>WENV170850551
MDTA01116178
208578
Cyanobacteria
CGG
Pro
>WENV170850109
MDTA01108042
401934
Cyanobacteria
GGT
Thr
>WENV170850845
MDTA01121649
401934
Cyanobacteria
GGT
Thr
>WENV170851206
MDTA01127838
401934
Cyanobacteria
GGT
Thr
>WENV170854220
MDTA01185126
401934
Cyanobacteria
GGT
Thr
>WENV170855183
MDTA01202090
401934
Cyanobacteria
GGT
Thr
>WENV170855365
MDTA01204591
401934
Cyanobacteria
GGT
Thr
>WENV170845554
MDTA01026126
282452
Cyanobacteria
GGC
Ala
>WENV170848946
MDTA01087582
282452
Cyanobacteria
GGC
Ala
>WENV170849622
MDTA01099089
282452
Cyanobacteria
GGC
Ala
>WENV170855193
MDTA01202371
282452
Cyanobacteria
GGC
Ala
>WENV170847106
MDTA01054197
221462
Cyanobacteria
CCT
Arg
>WENV170847118
MDTA01054411
221462
Cyanobacteria
CCT
Arg
>WENV170847677
MDTA01065271
118720
Cyanobacteria
CAA
Leu
>WENV170848133
MDTA01073516
118720
Cyanobacteria
CAA
Leu
>WENV170851087
MDTA01126027
118720
Cyanobacteria
CAA
Leu
>WENV170853720
MDTA01174678
118720
Cyanobacteria
CAA
Leu
>WENV170844144
MDTA01000231
414584
Cyanobacteria
GAC
Val
>WENV170845476
MDTA01024683
414584
Cyanobacteria
GAC
Val
>WENV170846927
MDTA01051080
414584
Cyanobacteria
GAC
Val
>WENV170847765
MDTA01066965
414584
Cyanobacteria
GAC
Val
>WENV170849748
MDTA01101657
414584
Cyanobacteria
GAC
Val
>WENV170850229
MDTA01110647
414584
Cyanobacteria
GAC
Val
>WENV170850379
MDTA01113051
414584
Cyanobacteria
GAC
Val
>WENV170853015
MDTA01161540
414584
Cyanobacteria
GAC
Val
>WENV170853537
MDTA01171692
414584
Cyanobacteria
GAC
Val
>WENV170855007
MDTA01198767
414584
Cyanobacteria
GAC
Val
>WENV170853557
MDTA01171972
38099
Cyanobacteria
GGA
Ser
>WENV170844259
MDTA01002686
285848
Cyanobacteria
CAT
Met
>WENV170848891
MDTA01086786
14711
Cyanobacteria
GCT
Ser
>WENV170853105
MDTA01162914
185359
Cyanobacteria
TCT
Arg
>WENV170844986
MDTA01015975
30082
Cyanobacteria
TGA
Ser
>WENV170846596
MDTA01045292
30082
Cyanobacteria
TGA
Ser
>WENV170849764
MDTA01102000
30082
Cyanobacteria
TGA
Ser
>WENV170854130
MDTA01183283
30082
Cyanobacteria
TGA
Ser
>WENV170855321
MDTA01203647
30082
Cyanobacteria
TGA
Ser
>WENV170855468
MDTA01206204
180925
Cyanobacteria
ACG
Arg
>WENV170847671
MDTA01065131
292138
Cyanobacteria
CCA
Trp
>WENV170855336
MDTA01204044
292138
Cyanobacteria
CCA
Trp
>WENV170848398
MDTA01078368
401929
Cyanobacteria
TTG
Gln
>WENV170856613
MDTA01227026
401929
Cyanobacteria
TTG
Gln
>WENV170844242
MDTA01002510
343795
Cyanobacteria
GGC
Ala
>WENV170844428
MDTA01006354
343795
Cyanobacteria
GGC
Ala
>WENV170844616
MDTA01009529
343795
Cyanobacteria
GGC
Ala
>WENV170844820
MDTA01012805
343795
Cyanobacteria
GGC
Ala
>WENV170844889
MDTA01013915
343795
Cyanobacteria
GGC
Ala
>WENV170845060
MDTA01017468
343795
Cyanobacteria
GGC
Ala
>WENV170845423
MDTA01023613
343795
Cyanobacteria
GGC
Ala
>WENV170845907
MDTA01032795
343795
Cyanobacteria
GGC
Ala
>WENV170846000
MDTA01034531
343795
Cyanobacteria
GGC
Ala
>WENV170846343
MDTA01040845
343795
Cyanobacteria
GGC
Ala
>WENV170846426
MDTA01042328
343795
Cyanobacteria
GGC
Ala
>WENV170846631
MDTA01045952
343795
Cyanobacteria
GGC
Ala
>WENV170846888
MDTA01050510
343795
Cyanobacteria
GGC
Ala
>WENV170846928
MDTA01051085
343795
Cyanobacteria
GGC
Ala
>WENV170846995
MDTA01052198
343795
Cyanobacteria
GGC
Ala
>WENV170847627
MDTA01064544
343795
Cyanobacteria
GGC
Ala
>WENV170847664
MDTA01065015
343795
Cyanobacteria
GGC
Ala
>WENV170847884
MDTA01069638
343795
Cyanobacteria
GGC
Ala
>WENV170848017
MDTA01071779
343795
Cyanobacteria
GGC
Ala
>WENV170848164
MDTA01073915
343795
Cyanobacteria
GGC
Ala
>WENV170848256
MDTA01075866
343795
Cyanobacteria
GGC
Ala
>WENV170848426
MDTA01078884
343795
Cyanobacteria
GGC
Ala
>WENV170848695
MDTA01083507
343795
Cyanobacteria
GGC
Ala
>WENV170848971
MDTA01088081
343795
Cyanobacteria
GGC
Ala
>WENV170849528
MDTA01097552
343795
Cyanobacteria
GGC
Ala
>WENV170849962
MDTA01105275
343795
Cyanobacteria
GGC
Ala
>WENV170851006
MDTA01124680
343795
Cyanobacteria
GGC
Ala
>WENV170851584
MDTA01134558
343795
Cyanobacteria
GGC
Ala
>WENV170851688
MDTA01136137
343795
Cyanobacteria
GGC
Ala
>WENV170851739
MDTA01136944
343795
Cyanobacteria
GGC
Ala
>WENV170851755
MDTA01137317
343795
Cyanobacteria
GGC
Ala
>WENV170851782
MDTA01137639
343795
Cyanobacteria
GGC
Ala
>WENV170851888
MDTA01139892
343795
Cyanobacteria
GGC
Ala
>WENV170852000
MDTA01141708
343795
Cyanobacteria
GGC
Ala
>WENV170852644
MDTA01154445
343795
Cyanobacteria
GGC
Ala
>WENV170852805
MDTA01157598
343795
Cyanobacteria
GGC
Ala
>WENV170852868
MDTA01158690
343795
Cyanobacteria
GGC
Ala
>WENV170852936
MDTA01159995
343795
Cyanobacteria
GGC
Ala
>WENV170853172
MDTA01164080
343795
Cyanobacteria
GGC
Ala
>WENV170853424
MDTA01169564
343795
Cyanobacteria
GGC
Ala
>WENV170853859
MDTA01177907
343795
Cyanobacteria
GGC
Ala
>WENV170854000
MDTA01180443
343795
Cyanobacteria
GGC
Ala
>WENV170854732
MDTA01194137
343795
Cyanobacteria
GGC
Ala
>WENV170854937
MDTA01197782
343795
Cyanobacteria
GGC
Ala
>WENV170855216
MDTA01202580
343795
Cyanobacteria
GGC
Ala
>WENV170855296
MDTA01203244
343795
Cyanobacteria
GGC
Ala
>WENV170856036
MDTA01216792
343795
Cyanobacteria
GGC
Ala
>WENV170856275
MDTA01220829
343795
Cyanobacteria
GGC
Ala
>WENV170856292
MDTA01221096
343795
Cyanobacteria
GGC
Ala
>WENV170856362
MDTA01222333
343795
Cyanobacteria
GGC
Ala
>WENV170856412
MDTA01223329
343795
Cyanobacteria
GGC
Ala
>WENV170856423
MDTA01223536
343795
Cyanobacteria
GGC
Ala
>WENV170856595
MDTA01226606
343795
Cyanobacteria
GGC
Ala
>WENV170856630
MDTA01227347
343795
Cyanobacteria
GGC
Ala
>WENV170856726
MDTA01228874
343795
Cyanobacteria
GGC
Ala
>WENV170847492
MDTA01061942
291400
Cyanobacteria
GTG
His
>WENV170846333
MDTA01040692
46946
Cyanobacteria
TAA
Leu
>WENV170849109
MDTA01090004
410287
Cyanobacteria
CCC
Gly
>WENV170845337
MDTA01022214
118688
Cyanobacteria
TAG
Leu
>WENV170849951
MDTA01105180
118688
Cyanobacteria
TAG
Leu
>WENV170850712
MDTA01119218
118688
Cyanobacteria
TAG
Leu
>WENV170850950
MDTA01123667
118688
Cyanobacteria
TAG
Leu
>WENV170852317
MDTA01147998
118688
Cyanobacteria
TAG
Leu
>WENV170852650
MDTA01154649
118688
Cyanobacteria
TAG
Leu
>WENV170853389
MDTA01168723
118688
Cyanobacteria
TAG
Leu
>WENV170854830
MDTA01195539
118688
Cyanobacteria
TAG
Leu
>WENV170855661
MDTA01209965
118688
Cyanobacteria
TAG
Leu
>WENV170846114
MDTA01036309
73307
Cyanobacteria
CAG
Leu
>WENV170849296
MDTA01093251
73307
Cyanobacteria
CAG
Leu
>WENV170846188
MDTA01037843
177220
Cyanobacteria
CAT
Met
>WENV170846769
MDTA01048333
177220
Cyanobacteria
CAT
Met
>WENV170846857
MDTA01049918
177220
Cyanobacteria
CAT
Met
>WENV170847897
MDTA01069885
177220
Cyanobacteria
CAT
Met
>WENV170848821
MDTA01085640
177220
Cyanobacteria
CAT
Met
>WENV170850088
MDTA01107639
177220
Cyanobacteria
CAT
Met
>WENV170850450
MDTA01114169
177220
Cyanobacteria
CAT
Met
>WENV170850561
MDTA01116267
177220
Cyanobacteria
CAT
Met
>WENV170852558
MDTA01152698
177220
Cyanobacteria
CAT
Met
>WENV170853678
MDTA01174312
177220
Cyanobacteria
CAT
Met
>WENV170854694
MDTA01193179
177220
Cyanobacteria
CAT
Met
>WENV170855302
MDTA01203389
177220
Cyanobacteria
CAT
Met
>WENV170855574
MDTA01208239
177220
Cyanobacteria
CAT
Met
>WENV170844879
MDTA01013700
219114
Cyanobacteria
GGG
Pro
>WENV170846934
MDTA01051136
219114
Cyanobacteria
GGG
Pro
>WENV170848960
MDTA01087932
219114
Cyanobacteria
GGG
Pro
>WENV170850265
MDTA01111191
219114
Cyanobacteria
GGG
Pro
>WENV170850648
MDTA01117822
219114
Cyanobacteria
GGG
Pro
>WENV170851308
MDTA01129684
219114
Cyanobacteria
GGG
Pro
>WENV170851783
MDTA01137700
219114
Cyanobacteria
GGG
Pro
>WENV170851938
MDTA01140542
219114
Cyanobacteria
GGG
Pro
>WENV170852677
MDTA01155137
219114
Cyanobacteria
GGG
Pro
>WENV170852741
MDTA01156246
219114
Cyanobacteria
GGG
Pro
>WENV170853238
MDTA01165343
219114
Cyanobacteria
GGG
Pro
>WENV170853652
MDTA01173861
219114
Cyanobacteria
GGG
Pro
>WENV170854255
MDTA01185763
219114
Cyanobacteria
GGG
Pro
>WENV170854818
MDTA01195442
219114
Cyanobacteria
GGG
Pro
>WENV170855557
MDTA01208106
219114
Cyanobacteria
GGG
Pro
>WENV170844490
MDTA01007250
185579
Cyanobacteria
CAT
Met
>WENV170851848
MDTA01138771
185579
Cyanobacteria
CAT
Met
>WENV170854504
MDTA01189629
185579
Cyanobacteria
CAT
Met
>WENV170845238
MDTA01020343
399503
Cyanobacteria
GTT
Asn
>WENV170847202
MDTA01056183
399503
Cyanobacteria
GTT
Asn
>WENV170849564
MDTA01098049
399503
Cyanobacteria
GTT
Asn
>WENV170849930
MDTA01104956
399503
Cyanobacteria
GTT
Asn
>WENV170850872
MDTA01122160
399503
Cyanobacteria
GTT
Asn
>WENV170850127
MDTA01108619
176367
Cyanobacteria
GGG
Pro
>WENV170853303
MDTA01166759
176367
Cyanobacteria
GGG
Pro
>WENV170854264
MDTA01185961
176367
Cyanobacteria
GGG
Pro
>WENV170855390
MDTA01204995
176367
Cyanobacteria
GGG
Pro
>WENV170855451
MDTA01205794
404675
Cyanobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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