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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
108 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170845519
MDTA01025377
284706
Gammaproteobacteria
GTT
Asn
>WENV170852632
MDTA01154229
284706
Gammaproteobacteria
GTT
Asn
>WENV170848818
MDTA01085552
73123
Gammaproteobacteria
CAA
Leu
>WENV170856297
MDTA01221201
73123
Gammaproteobacteria
CAA
Leu
>WENV170844761
MDTA01011702
480941
Gammaproteobacteria
TCC
Gly
>WENV170854708
MDTA01193454
209464
Gammaproteobacteria
CCG
Arg
>WENV170848443
MDTA01079203
20664
Gammaproteobacteria
GCT
Ser
>WENV170845764
MDTA01030214
281275
Gammaproteobacteria
TGT
Thr
>WENV170846141
MDTA01036998
281275
Gammaproteobacteria
TGT
Thr
>WENV170851740
MDTA01136959
20273
Gammaproteobacteria
TGA
Ser
>WENV170854366
MDTA01187550
118218
Gammaproteobacteria
TAG
Leu
>WENV170851530
MDTA01133552
328691
Gammaproteobacteria
GGT
Thr
>WENV170855313
MDTA01203517
314350
Gammaproteobacteria
CCA
Trp
>WENV170846071
MDTA01035703
314350
Gammaproteobacteria
CCA
Trp
>WENV170851808
MDTA01138028
340901
Gammaproteobacteria
CCA
Trp
>WENV170847270
MDTA01057524
180053
Gammaproteobacteria
CAT
Met
>WENV170844196
MDTA01001612
180053
Gammaproteobacteria
CAT
Met
>WENV170854961
MDTA01198103
176662
Gammaproteobacteria
ACG
Arg
>WENV170854960
MDTA01198103
176662
Gammaproteobacteria
ACG
Arg
>WENV170851622
MDTA01135338
176662
Gammaproteobacteria
ACG
Arg
>WENV170848018
MDTA01071834
120827
Gammaproteobacteria
GAG
Leu
>WENV170854959
MDTA01198103
29834
Gammaproteobacteria
GCT
Ser
>WENV170850736
MDTA01119562
218635
Gammaproteobacteria
GAC
Val
>WENV170848894
MDTA01086855
218635
Gammaproteobacteria
GAC
Val
>WENV170850309
MDTA01111958
292194
Gammaproteobacteria
GGT
Thr
>WENV170848008
MDTA01071647
292194
Gammaproteobacteria
GGT
Thr
>WENV170849846
MDTA01103285
176520
Gammaproteobacteria
CAT
Met
>WENV170854177
MDTA01184498
73501
Gammaproteobacteria
GAG
Leu
>WENV170845558
MDTA01026148
140925
Gammaproteobacteria
GTA
Tyr
>WENV170856190
MDTA01219199
140925
Gammaproteobacteria
GTA
Tyr
>WENV170848040
MDTA01072073
229289
Gammaproteobacteria
TGG
Pro
>WENV170852265
MDTA01146867
229289
Gammaproteobacteria
TGG
Pro
>WENV170853820
MDTA01176951
229289
Gammaproteobacteria
TGG
Pro
>WENV170855098
MDTA01200504
229289
Gammaproteobacteria
TGG
Pro
>WENV170855626
MDTA01209293
229289
Gammaproteobacteria
TGG
Pro
>WENV170856299
MDTA01221201
281282
Gammaproteobacteria
TTC
Glu
>WENV170853107
MDTA01162944
281282
Gammaproteobacteria
TTC
Glu
>WENV170845121
MDTA01018233
282550
Gammaproteobacteria
TAC
Val
>WENV170846930
MDTA01051094
282550
Gammaproteobacteria
TAC
Val
>WENV170847789
MDTA01067406
282550
Gammaproteobacteria
TAC
Val
>WENV170848031
MDTA01072032
282550
Gammaproteobacteria
TAC
Val
>WENV170847569
MDTA01063561
74240
Gammaproteobacteria
CAA
Leu
>WENV170854451
MDTA01188837
329164
Gammaproteobacteria
TTT
Lys
>WENV170854287
MDTA01186222
329164
Gammaproteobacteria
TTT
Lys
>WENV170850119
MDTA01108250
329164
Gammaproteobacteria
TTT
Lys
>WENV170849983
MDTA01105749
13452
Gammaproteobacteria
GCT
Ser
>WENV170852063
MDTA01142960
176663
Gammaproteobacteria
GGG
Pro
>WENV170848432
MDTA01079027
176663
Gammaproteobacteria
GGG
Pro
>WENV170850986
MDTA01124411
178471
Gammaproteobacteria
GTT
Asn
>WENV170856310
MDTA01221321
178471
Gammaproteobacteria
GTT
Asn
>WENV170845344
MDTA01022337
74339
Gammaproteobacteria
GAG
Leu
>WENV170852341
MDTA01148656
74339
Gammaproteobacteria
GAG
Leu
>WENV170845144
MDTA01018704
60942
Gammaproteobacteria
GGA
Ser
>WENV170853199
MDTA01164491
480516
Gammaproteobacteria
GCA
Cys
>WENV170851382
MDTA01131185
480516
Gammaproteobacteria
GCA
Cys
>WENV170849379
MDTA01094791
480516
Gammaproteobacteria
GCA
Cys
>WENV170847947
MDTA01070697
480516
Gammaproteobacteria
GCA
Cys
>WENV170846033
MDTA01035242
480516
Gammaproteobacteria
GCA
Cys
>WENV170846067
MDTA01035637
338424
Gammaproteobacteria
TAC
Val
>WENV170854917
MDTA01197344
338424
Gammaproteobacteria
TAC
Val
>WENV170856511
MDTA01225012
56694
Gammaproteobacteria
GGA
Ser
>WENV170845645
MDTA01027793
291402
Gammaproteobacteria
GTG
His
>WENV170847344
MDTA01059133
292174
Gammaproteobacteria
GAA
Phe
>WENV170851036
MDTA01125316
56340
Gammaproteobacteria
GGA
Ser
>WENV170852494
MDTA01151477
290359
Gammaproteobacteria
TTT
Lys
>WENV170856191
MDTA01219199
481325
Gammaproteobacteria
TCC
Gly
>WENV170845559
MDTA01026148
481325
Gammaproteobacteria
TCC
Gly
>WENV170846570
MDTA01044663
179888
Gammaproteobacteria
ACG
Arg
>WENV170849984
MDTA01105749
232119
Gammaproteobacteria
ACG
Arg
>WENV170849985
MDTA01105749
232119
Gammaproteobacteria
ACG
Arg
>WENV170851947
MDTA01140725
74048
Gammaproteobacteria
CAA
Leu
>WENV170850443
MDTA01114076
481678
Gammaproteobacteria
GCA
Cys
>WENV170856298
MDTA01221201
306288
Gammaproteobacteria
GCC
Gly
>WENV170855019
MDTA01198968
306288
Gammaproteobacteria
GCC
Gly
>WENV170853467
MDTA01170281
306288
Gammaproteobacteria
GCC
Gly
>WENV170853198
MDTA01164491
306288
Gammaproteobacteria
GCC
Gly
>WENV170848388
MDTA01078211
306288
Gammaproteobacteria
GCC
Gly
>WENV170846032
MDTA01035242
306288
Gammaproteobacteria
GCC
Gly
>WENV170849576
MDTA01098231
176664
Gammaproteobacteria
CCT
Arg
>WENV170854397
MDTA01187982
176664
Gammaproteobacteria
CCT
Arg
>WENV170856442
MDTA01223909
488965
Gammaproteobacteria
GCA
Cys
>WENV170854996
MDTA01198653
488965
Gammaproteobacteria
GCA
Cys
>WENV170853211
MDTA01164833
488965
Gammaproteobacteria
GCA
Cys
>WENV170846773
MDTA01048425
488965
Gammaproteobacteria
GCA
Cys
>WENV170844607
MDTA01009196
488965
Gammaproteobacteria
GCA
Cys
>WENV170844445
MDTA01006577
488965
Gammaproteobacteria
GCA
Cys
>WENV170849050
MDTA01088873
180680
Gammaproteobacteria
GAC
Val
>WENV170848089
MDTA01072840
176301
Gammaproteobacteria
GAT
Ile
>WENV170850233
MDTA01110708
176301
Gammaproteobacteria
GAT
Ile
>WENV170856023
MDTA01216669
176301
Gammaproteobacteria
GAT
Ile
>WENV170852572
MDTA01153104
176665
Gammaproteobacteria
CGG
Pro
>WENV170850477
MDTA01114762
176665
Gammaproteobacteria
CGG
Pro
>WENV170845080
MDTA01017676
176665
Gammaproteobacteria
CGG
Pro
>WENV170847967
MDTA01071002
285547
Gammaproteobacteria
TTG
Gln
>WENV170849075
MDTA01089218
180681
Gammaproteobacteria
TGG
Pro
>WENV170846031
MDTA01035242
23169
Gammaproteobacteria
GGA
Ser
>WENV170856008
MDTA01216273
201377
Gammaproteobacteria
TGG
Pro
>WENV170850373
MDTA01112963
201377
Gammaproteobacteria
TGG
Pro
>WENV170850515
MDTA01115428
282018
Gammaproteobacteria
TGT
Thr
>WENV170849459
MDTA01096304
281283
Gammaproteobacteria
GTG
His
>WENV170849007
MDTA01088407
281939
Gammaproteobacteria
TTT
Lys
>WENV170848171
MDTA01074060
281939
Gammaproteobacteria
TTT
Lys
>WENV170847349
MDTA01059202
176478
Gammaproteobacteria
CAT
Met
>WENV170853501
MDTA01170836
176478
Gammaproteobacteria
CAT
Met
>WENV170856189
MDTA01219199
282902
Gammaproteobacteria
TGT
Thr
>WENV170845557
MDTA01026148
282902
Gammaproteobacteria
TGT
Thr
>WENV170854116
MDTA01183006
20968
Gammaproteobacteria
TGA
Ser
>WENV170847881
MDTA01069596
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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