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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170997054
MWWG01024006
147816
Bacteroidetes
CAA
Leu
>WENV170996887
MWWG01002580
498978
Bacteroidetes
CCA
Trp
>WENV170996977
MWWG01012918
498978
Bacteroidetes
CCA
Trp
>WENV170996963
MWWG01010999
170069
Bacteroidetes
GAT
Ile
>WENV170997438
MWWG01133097
284496
Bacteroidetes
GCC
Gly
>WENV170997439
MWWG01133097
284496
Bacteroidetes
GCC
Gly
>WENV170997675
MWWG01236640
179685
Bacteroidetes
GGG
Pro
>WENV170997516
MWWG01168412
106365
Bacteroidetes
GTA
Tyr
>WENV170997143
MWWG01038039
175908
Bacteroidetes
GTC
Asp
>WENV170997106
MWWG01031867
240785
Bacteroidetes
GTC
Asp
>WENV170997270
MWWG01071278
179691
Bacteroidetes
GTT
Asn
>WENV170997161
MWWG01041022
165648
Bacteroidetes
TAC
Val
>WENV170997194
MWWG01045178
118464
Bacteroidetes
TAG
Leu
>WENV170997458
MWWG01143479
284499
Bacteroidetes
TGT
Thr
>WENV170997674
MWWG01236324
284498
Bacteroidetes
TTG
Gln
>WENV170997188
MWWG01044227
284068
Bacteroidetes
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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