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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180100218
OAOL01000478
282824
Actinomycetota
CCT
Arg
>WENV180100228
OAOL01002068
282829
Actinomycetota
GCC
Gly
>WENV180100226
OAOL01000788
282825
Actinomycetota
CGT
Thr
>WENV180100222
OAOL01000680
20882
Actinomycetota
CGA
Ser
>WENV180100227
OAOL01001678
289180
Actinomycetota
CCG
Arg
>WENV180100223
OAOL01000762
99900
Actinomycetota
GTA
Tyr
>WENV180100242
OAOL01003405
480922
Actinomycetota
GCA
Cys
>WENV180100231
OAOL01002202
282826
Actinomycetota
GTG
His
>WENV180100252
OAOL01004954
176402
Actinomycetota
CAA
Leu
>WENV180100225
OAOL01000762
281100
Actinomycetota
CAT
Met
>WENV180100244
OAOL01004070
281097
Actinomycetota
TTT
Lys
>WENV180100267
OAOL01008720
46760
Actinomycetota
GAG
Leu
>WENV180100259
OAOL01006030
399219
Actinomycetota
TAC
Val
>WENV180100266
OAOL01008107
29625
Actinomycetota
TGA
Ser
>WENV180100258
OAOL01005755
13308
Actinomycetota
GCT
Ser
>WENV180100261
OAOL01007379
307253
Actinomycetota
TCT
Arg
>WENV180100236
OAOL01002378
200584
Actinomycetota
CAT
Met
>WENV180100246
OAOL01004507
282827
Actinomycetota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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