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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180122439
OASU01000143
178658
Actinomycetota
CAA
Leu
>WENV180122281
OASU01000023
179231
Actinomycetota
TAC
Val
>WENV180122357
OASU01000055
176499
Actinomycetota
CAT
Met
>WENV180122367
OASU01000066
280498
Actinomycetota
GTT
Asn
>WENV180122368
OASU01000066
280498
Actinomycetota
GTT
Asn
>WENV180122436
OASU01000141
280498
Actinomycetota
GTT
Asn
>WENV180122445
OASU01000158
140768
Actinomycetota
TAG
Leu
>WENV180122637
OASU01008964
284890
Actinomycetota
CTT
Lys
>WENV180122353
OASU01000052
175837
Actinomycetota
ACG
Arg
>WENV180122354
OASU01000052
175837
Actinomycetota
ACG
Arg
>WENV180122383
OASU01000073
280441
Actinomycetota
CCG
Arg
>WENV180122374
OASU01000066
176638
Actinomycetota
GGG
Pro
>WENV180122318
OASU01000032
280524
Actinomycetota
TGC
Ala
>WENV180122429
OASU01000130
176723
Actinomycetota
TCT
Arg
>WENV180122394
OASU01000084
281239
Actinomycetota
TTT
Lys
>WENV180122319
OASU01000032
280523
Actinomycetota
GGC
Ala
>WENV180122435
OASU01000141
280523
Actinomycetota
GGC
Ala
>WENV180122418
OASU01000122
176555
Actinomycetota
CAT
Met
>WENV180122358
OASU01000055
20205
Actinomycetota
GCT
Ser
>WENV180122315
OASU01000032
480329
Actinomycetota
CCC
Gly
>WENV180122334
OASU01000043
175882
Actinomycetota
TGG
Pro
>WENV180122437
OASU01000141
480319
Actinomycetota
TTG
Gln
>WENV180122332
OASU01000040
280489
Actinomycetota
CTC
Glu
>WENV180122282
OASU01000023
280499
Actinomycetota
CCT
Arg
>WENV180122333
OASU01000040
398853
Actinomycetota
CTG
Gln
>WENV180122356
OASU01000055
117903
Actinomycetota
GTA
Tyr
>WENV180122438
OASU01000143
147796
Actinomycetota
TAA
Leu
>WENV180122444
OASU01000158
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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