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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180137518
OATP01000006
284106
Firmicutes
GGT
Thr
>WENV180137623
OATP01000091
481244
Firmicutes
CCC
Gly
>WENV180137624
OATP01000094
400626
Firmicutes
CCG
Arg
>WENV180137625
OATP01000096
282730
Firmicutes
TAC
Val
>WENV180137626
OATP01000096
284112
Firmicutes
TTT
Lys
>WENV180137630
OATP01000096
176769
Firmicutes
ACG
Arg
>WENV180137632
OATP01000096
179261
Firmicutes
CGG
Pro
>WENV180137637
OATP01000100
20870
Firmicutes
CGA
Ser
>WENV180137664
OATP01000165
284105
Firmicutes
GTT
Asn
>WENV180137665
OATP01000165
140922
Firmicutes
GTA
Tyr
>WENV180137666
OATP01000165
46845
Firmicutes
AAG
Leu
>WENV180137667
OATP01000165
407852
Firmicutes
TTC
Glu
>WENV180137668
OATP01000165
284104
Firmicutes
CGT
Thr
>WENV180137683
OATP01000192
284107
Firmicutes
CGC
Ala
>WENV180137684
OATP01000192
284108
Firmicutes
GGC
Ala
>WENV180137700
OATP01000243
280547
Firmicutes
GTC
Asp
>WENV180137701
OATP01000243
291553
Firmicutes
GAA
Phe
>WENV180137709
OATP01000263
284105
Firmicutes
GTT
Asn
>WENV180137710
OATP01000263
8644
Firmicutes
GGA
Ser
>WENV180137726
OATP01000289
56503
Firmicutes
CAG
Leu
>WENV180137729
OATP01000318
481173
Firmicutes
CTG
Gln
>WENV180137775
OATP01000468
179263
Firmicutes
TCT
Arg
>WENV180137797
OATP01000549
20943
Firmicutes
CGA
Ser
>WENV180137837
OATP01000869
282730
Firmicutes
TAC
Val
>WENV180137838
OATP01000869
284112
Firmicutes
TTT
Lys
>WENV180137839
OATP01000869
284886
Firmicutes
TGT
Thr
>WENV180137841
OATP01000869
178962
Firmicutes
ACG
Arg
>WENV180137842
OATP01000869
197141
Firmicutes
TGG
Pro
>WENV180137846
OATP01000869
178945
Firmicutes
GTC
Asp
>WENV180137847
OATP01000869
306976
Firmicutes
GAA
Phe
>WENV180137849
OATP01000869
179264
Firmicutes
GAT
Ile
>WENV180137850
OATP01000869
20502
Firmicutes
GCT
Ser
>WENV180137851
OATP01000869
407852
Firmicutes
TTC
Glu
>WENV180137852
OATP01000869
4033
Firmicutes
TGA
Ser
>WENV180137854
OATP01000869
178945
Firmicutes
GTC
Asp
>WENV180137855
OATP01000869
284110
Firmicutes
GAA
Phe
>WENV180137856
OATP01000869
140922
Firmicutes
GTA
Tyr
>WENV180137857
OATP01000869
481151
Firmicutes
CCA
Trp
>WENV180137858
OATP01000869
284111
Firmicutes
GTG
His
>WENV180137859
OATP01000869
407007
Firmicutes
TTG
Gln
>WENV180137860
OATP01000869
481245
Firmicutes
GCA
Cys
>WENV180137861
OATP01000869
73685
Firmicutes
CAA
Leu
>WENV180137906
OATP01001401
289713
Firmicutes
TGT
Thr
>WENV180137909
OATP01001401
296855
Firmicutes
GGT
Thr
>WENV180137910
OATP01001401
184495
Firmicutes
CAT
Met
>WENV180137933
OATP01001657
282730
Firmicutes
TAC
Val
>WENV180137935
OATP01001667
20942
Firmicutes
GGA
Ser
>WENV180137996
OATP01002503
408869
Firmicutes
CTC
Glu
>WENV180137998
OATP01002542
284109
Firmicutes
>WENV180138000
OATP01002551
119459
Firmicutes
TAG
Leu
>WENV180138006
OATP01002618
289716
Firmicutes
GTG
His
>WENV180138007
OATP01002618
404091
Firmicutes
TTG
Gln
>WENV180138008
OATP01002618
289761
Firmicutes
TTT
Lys
>WENV180138025
OATP01003058
289717
Firmicutes
CTT
Lys
>WENV180138029
OATP01003320
400752
Firmicutes
GTT
Asn
>WENV180138065
OATP01004620
20932
Firmicutes
GCT
Ser
>WENV180138082
OATP01005352
179264
Firmicutes
GAT
Ile
>WENV180138178
OATP01012510
291579
Firmicutes
GAA
Phe
>WENV180138179
OATP01012510
309916
Firmicutes
TTT
Lys
>WENV180138229
OATP01021097
119278
Firmicutes
TAG
Leu
>WENV180138237
OATP01023768
398935
Firmicutes
>WENV180138261
OATP01033137
184537
Firmicutes
ACG
Arg
>WENV180138263
OATP01034631
408781
Firmicutes
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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