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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180148995
OAUK01008971
481233
Actinomycetota
CCC
Gly
>WENV180149150
OAUK01021525
176499
Actinomycetota
CAT
Met
>WENV180149094
OAUK01014277
175907
Actinomycetota
TAC
Val
>WENV180148881
OAUK01004738
147829
Actinomycetota
TAA
Leu
>WENV180149210
OAUK01032196
283311
Actinomycetota
CCT
Arg
>WENV180149021
OAUK01010507
349003
Actinomycetota
CCG
Arg
>WENV180148781
OAUK01002567
280498
Actinomycetota
GTT
Asn
>WENV180149218
OAUK01033851
295964
Actinomycetota
GTT
Asn
>WENV180149177
OAUK01024879
295964
Actinomycetota
GTT
Asn
>WENV180148918
OAUK01005656
295964
Actinomycetota
GTT
Asn
>WENV180148901
OAUK01005360
56083
Actinomycetota
CGA
Ser
>WENV180148863
OAUK01004307
140768
Actinomycetota
TAG
Leu
>WENV180149151
OAUK01021527
56384
Actinomycetota
TGA
Ser
>WENV180148765
OAUK01002458
176075
Actinomycetota
TCT
Arg
>WENV180149252
OAUK01038521
175848
Actinomycetota
TGG
Pro
>WENV180149243
OAUK01036744
176078
Actinomycetota
GGG
Pro
>WENV180149205
OAUK01030768
176078
Actinomycetota
GGG
Pro
>WENV180149009
OAUK01009917
482604
Actinomycetota
TTG
Gln
>WENV180149131
OAUK01018958
59689
Actinomycetota
GGA
Ser
>WENV180149065
OAUK01013605
59689
Actinomycetota
GGA
Ser
>WENV180148977
OAUK01008123
59689
Actinomycetota
GGA
Ser
>WENV180148797
OAUK01003040
59689
Actinomycetota
GGA
Ser
>WENV180148947
OAUK01006875
175837
Actinomycetota
ACG
Arg
>WENV180148946
OAUK01006875
175837
Actinomycetota
ACG
Arg
>WENV180148800
OAUK01003082
175837
Actinomycetota
ACG
Arg
>WENV180148799
OAUK01003082
175837
Actinomycetota
ACG
Arg
>WENV180149107
OAUK01015404
29393
Actinomycetota
GCT
Ser
>WENV180148635
OAUK01000924
29393
Actinomycetota
GCT
Ser
>WENV180148716
OAUK01001715
280549
Actinomycetota
CAC
Val
>WENV180148752
OAUK01002324
280549
Actinomycetota
CAC
Val
>WENV180148855
OAUK01004222
280549
Actinomycetota
CAC
Val
>WENV180148857
OAUK01004229
349164
Actinomycetota
CTC
Glu
>WENV180149183
OAUK01025682
56383
Actinomycetota
CGA
Ser
>WENV180148643
OAUK01001052
20450
Actinomycetota
GAG
Leu
>WENV180148892
OAUK01005169
280702
Actinomycetota
GGC
Ala
>WENV180148893
OAUK01005169
280702
Actinomycetota
GGC
Ala
>WENV180148969
OAUK01007776
280702
Actinomycetota
GGC
Ala
>WENV180148970
OAUK01007776
280702
Actinomycetota
GGC
Ala
>WENV180148715
OAUK01001715
434162
Actinomycetota
GAC
Val
>WENV180148751
OAUK01002324
434162
Actinomycetota
GAC
Val
>WENV180148854
OAUK01004222
434162
Actinomycetota
GAC
Val
>WENV180148805
OAUK01003226
176077
Actinomycetota
CAT
Met
>WENV180149102
OAUK01014824
283312
Actinomycetota
GTG
His
>WENV180148905
OAUK01005417
280524
Actinomycetota
TGC
Ala
>WENV180148830
OAUK01003552
280524
Actinomycetota
TGC
Ala
>WENV180149211
OAUK01032925
283313
Actinomycetota
CCG
Arg
>WENV180149138
OAUK01019657
398948
Actinomycetota
TTC
Glu
>WENV180149113
OAUK01016162
398948
Actinomycetota
TTC
Glu
>WENV180148848
OAUK01004200
398948
Actinomycetota
TTC
Glu
>WENV180149002
OAUK01009292
176723
Actinomycetota
TCT
Arg
>WENV180148999
OAUK01009079
281239
Actinomycetota
TTT
Lys
>WENV180148973
OAUK01007957
150272
Actinomycetota
TAA
Leu
>WENV180148755
OAUK01002351
117777
Actinomycetota
>WENV180149149
OAUK01021525
117777
Actinomycetota
>WENV180149155
OAUK01022127
280523
Actinomycetota
GGC
Ala
>WENV180148906
OAUK01005417
280523
Actinomycetota
GGC
Ala
>WENV180148889
OAUK01005079
184565
Actinomycetota
TGG
Pro
>WENV180148756
OAUK01002351
175949
Actinomycetota
CAT
Met
>WENV180149115
OAUK01016281
227544
Actinomycetota
TAC
Val
>WENV180148971
OAUK01007859
227544
Actinomycetota
TAC
Val
>WENV180149010
OAUK01010087
191955
Actinomycetota
TGT
Thr
>WENV180149189
OAUK01027185
20415
Actinomycetota
GAG
Leu
>WENV180148804
OAUK01003185
280544
Actinomycetota
GTG
His
>WENV180149199
OAUK01028628
280496
Actinomycetota
CGT
Thr
>WENV180148737
OAUK01002048
280703
Actinomycetota
CCT
Arg
>WENV180148954
OAUK01007007
280703
Actinomycetota
CCT
Arg
>WENV180149263
OAUK01042188
140879
Actinomycetota
TAG
Leu
>WENV180148648
OAUK01001105
184157
Actinomycetota
TGG
Pro
>WENV180149180
OAUK01025096
178569
Actinomycetota
CAT
Met
>WENV180148862
OAUK01004307
323758
Actinomycetota
CGT
Thr
>WENV180148916
OAUK01005478
480329
Actinomycetota
CCC
Gly
>WENV180148723
OAUK01001797
56451
Actinomycetota
CGA
Ser
>WENV180149000
OAUK01009179
175882
Actinomycetota
TGG
Pro
>WENV180149164
OAUK01023432
99865
Actinomycetota
CAG
Leu
>WENV180148885
OAUK01004850
222475
Actinomycetota
CTT
Lys
>WENV180149001
OAUK01009183
280499
Actinomycetota
CCT
Arg
>WENV180148858
OAUK01004229
398853
Actinomycetota
CTG
Gln
>WENV180149118
OAUK01016666
175843
Actinomycetota
CAA
Leu
>WENV180149033
OAUK01010921
175843
Actinomycetota
CAA
Leu
>WENV180149061
OAUK01012964
56075
Actinomycetota
TGA
Ser
>WENV180148829
OAUK01003552
179238
Actinomycetota
GAT
Ile
>WENV180149204
OAUK01030625
60767
Actinomycetota
TGA
Ser
>WENV180149206
OAUK01031826
280470
Actinomycetota
CGT
Thr
>WENV180149226
OAUK01034357
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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