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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180277134
OBHV01077766
2694
Gammaproteobacteria
>WENV180276947
OBHV01011507
422716
Gammaproteobacteria
TTG
Gln
>WENV180276784
OBHV01000045
291796
Gammaproteobacteria
GGC
Ala
>WENV180277100
OBHV01062145
185999
Gammaproteobacteria
CCG
Arg
>WENV180276789
OBHV01000049
311084
Gammaproteobacteria
GCC
Gly
>WENV180276980
OBHV01020566
297790
Gammaproteobacteria
TGC
Ala
>WENV180276775
OBHV01000006
283226
Gammaproteobacteria
TAC
Val
>WENV180276932
OBHV01009630
118322
Gammaproteobacteria
TAA
Leu
>WENV180276817
OBHV01000311
281418
Gammaproteobacteria
TGC
Ala
>WENV180276816
OBHV01000311
176301
Gammaproteobacteria
GAT
Ile
>WENV180276852
OBHV01001086
405482
Gammaproteobacteria
TTG
Gln
>WENV180276804
OBHV01000176
281791
Gammaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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