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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
113 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180331692
OBLC01000113
99852
Bacillota
GTA
Tyr
>WENV180331868
OBLC01001313
343590
Bacillota
GCC
Gly
>WENV180332087
OBLC01028527
280500
Bacillota
TGC
Ala
>WENV180332113
OBLC01036530
280500
Bacillota
TGC
Ala
>WENV180332129
OBLC01041026
280500
Bacillota
TGC
Ala
>WENV180331688
OBLC01000113
349107
Bacillota
GCC
Gly
>WENV180331690
OBLC01000113
349107
Bacillota
GCC
Gly
>WENV180331753
OBLC01000270
349107
Bacillota
GCC
Gly
>WENV180331778
OBLC01000328
349107
Bacillota
GCC
Gly
>WENV180331691
OBLC01000113
405363
Bacillota
GCA
Cys
>WENV180331792
OBLC01000363
290391
Bacillota
TAC
Val
>WENV180331670
OBLC01000093
290391
Bacillota
TAC
Val
>WENV180331622
OBLC01000045
290391
Bacillota
TAC
Val
>WENV180331777
OBLC01000328
280428
Bacillota
GAA
Phe
>WENV180331687
OBLC01000113
280428
Bacillota
GAA
Phe
>WENV180332117
OBLC01039098
179917
Bacillota
CAT
Met
>WENV180331807
OBLC01000415
179917
Bacillota
CAT
Met
>WENV180331754
OBLC01000270
280466
Bacillota
TAC
Val
>WENV180331984
OBLC01009639
280492
Bacillota
CTT
Lys
>WENV180331825
OBLC01000582
175842
Bacillota
CAC
Val
>WENV180331763
OBLC01000298
228119
Bacillota
TCT
Arg
>WENV180331769
OBLC01000298
228119
Bacillota
TCT
Arg
>WENV180332137
OBLC01043696
228119
Bacillota
TCT
Arg
>WENV180332267
OBLC01131238
348419
Bacillota
GTT
Asn
>WENV180332149
OBLC01046911
348419
Bacillota
GTT
Asn
>WENV180332058
OBLC01022028
348419
Bacillota
GTT
Asn
>WENV180331839
OBLC01000765
184497
Bacillota
GGG
Pro
>WENV180331742
OBLC01000201
179176
Bacillota
ACG
Arg
>WENV180332154
OBLC01047601
215243
Bacillota
CAT
Met
>WENV180331833
OBLC01000638
190476
Bacillota
CAT
Met
>WENV180332133
OBLC01041665
82124
Bacillota
TAA
Leu
>WENV180331824
OBLC01000577
82124
Bacillota
TAA
Leu
>WENV180331626
OBLC01000050
73664
Bacillota
CAG
Leu
>WENV180331856
OBLC01001088
280447
Bacillota
GAC
Val
>WENV180331760
OBLC01000296
280447
Bacillota
GAC
Val
>WENV180331723
OBLC01000149
5692
Bacillota
GCT
Ser
>WENV180332021
OBLC01014449
175825
Bacillota
GAT
Ile
>WENV180331735
OBLC01000169
73009
Bacillota
CAG
Leu
>WENV180331715
OBLC01000132
73009
Bacillota
CAG
Leu
>WENV180331714
OBLC01000132
291581
Bacillota
CGG
Pro
>WENV180331710
OBLC01000131
175859
Bacillota
TCT
Arg
>WENV180332020
OBLC01014449
280436
Bacillota
TGC
Ala
>WENV180332131
OBLC01041665
175847
Bacillota
GTC
Asp
>WENV180331620
OBLC01000042
175831
Bacillota
ACG
Arg
>WENV180331883
OBLC01001536
179810
Bacillota
TCT
Arg
>WENV180331826
OBLC01000587
284627
Bacillota
GAA
Phe
>WENV180331821
OBLC01000576
284627
Bacillota
GAA
Phe
>WENV180332086
OBLC01028527
195824
Bacillota
GAT
Ile
>WENV180331813
OBLC01000476
480322
Bacillota
CTG
Gln
>WENV180331713
OBLC01000132
480322
Bacillota
CTG
Gln
>WENV180332082
OBLC01027499
187364
Bacillota
CAT
Met
>WENV180332252
OBLC01118697
401685
Bacillota
TTG
Gln
>WENV180331686
OBLC01000107
175868
Bacillota
GTT
Asn
>WENV180331656
OBLC01000068
175868
Bacillota
GTT
Asn
>WENV180332248
OBLC01112753
314834
Bacillota
TGC
Ala
>WENV180331725
OBLC01000151
322848
Bacillota
CTT
Lys
>WENV180331724
OBLC01000151
398854
Bacillota
CTC
Glu
>WENV180331655
OBLC01000068
398854
Bacillota
CTC
Glu
>WENV180331666
OBLC01000090
291576
Bacillota
CCC
Gly
>WENV180332261
OBLC01127841
284105
Bacillota
GTT
Asn
>WENV180332293
OBLC01132678
497729
Bacillota
CCA
Trp
>WENV180331878
OBLC01001522
497729
Bacillota
CCA
Trp
>WENV180331803
OBLC01000415
175899
Bacillota
GTC
Asp
>WENV180332192
OBLC01066402
303718
Bacillota
TGT
Thr
>WENV180332120
OBLC01039857
56079
Bacillota
AAG
Leu
>WENV180332034
OBLC01016477
56079
Bacillota
AAG
Leu
>WENV180331892
OBLC01001715
323864
Bacillota
TGC
Ala
>WENV180332190
OBLC01065289
175911
Bacillota
GTC
Asp
>WENV180331997
OBLC01012513
292374
Bacillota
TGC
Ala
>WENV180332278
OBLC01131512
398857
Bacillota
TTC
Glu
>WENV180332150
OBLC01046911
398857
Bacillota
TTC
Glu
>WENV180332059
OBLC01022028
398857
Bacillota
TTC
Glu
>WENV180332275
OBLC01131426
117745
Bacillota
GTA
Tyr
>WENV180331636
OBLC01000056
280444
Bacillota
GGT
Thr
>WENV180331635
OBLC01000056
280444
Bacillota
GGT
Thr
>WENV180331784
OBLC01000351
483485
Bacillota
CCC
Gly
>WENV180331757
OBLC01000281
179755
Bacillota
CCG
Arg
>WENV180332284
OBLC01132401
58120
Bacillota
AAG
Leu
>WENV180332108
OBLC01034926
46835
Bacillota
TAA
Leu
>WENV180331870
OBLC01001402
330413
Bacillota
CTT
Lys
>WENV180331834
OBLC01000638
398832
Bacillota
TTC
Glu
>WENV180332285
OBLC01132469
118669
Bacillota
GTA
Tyr
>WENV180331823
OBLC01000577
118669
Bacillota
GTA
Tyr
>WENV180332147
OBLC01046707
175915
Bacillota
GTC
Asp
>WENV180332139
OBLC01043696
280476
Bacillota
TTT
Lys
>WENV180331911
OBLC01002544
280476
Bacillota
TTT
Lys
>WENV180331843
OBLC01000789
280476
Bacillota
TTT
Lys
>WENV180331772
OBLC01000298
280476
Bacillota
TTT
Lys
>WENV180331765
OBLC01000298
280476
Bacillota
TTT
Lys
>WENV180331663
OBLC01000083
280476
Bacillota
TTT
Lys
>WENV180332202
OBLC01076665
280462
Bacillota
GAA
Phe
>WENV180331987
OBLC01011053
280462
Bacillota
GAA
Phe
>WENV180331991
OBLC01011138
398852
Bacillota
CTC
Glu
>WENV180331996
OBLC01012513
201856
Bacillota
GAT
Ile
>WENV180332064
OBLC01022276
280483
Bacillota
GAA
Phe
>WENV180331817
OBLC01000531
406186
Bacillota
CTC
Glu
>WENV180332251
OBLC01118697
175857
Bacillota
GTG
His
>WENV180331884
OBLC01001536
175857
Bacillota
GTG
His
>WENV180332065
OBLC01022276
285756
Bacillota
GCC
Gly
>WENV180331781
OBLC01000335
398833
Bacillota
TGT
Thr
>WENV180331789
OBLC01000363
285556
Bacillota
TGT
Thr
>WENV180331671
OBLC01000093
285556
Bacillota
TGT
Thr
>WENV180332289
OBLC01132639
175849
Bacillota
GTC
Asp
>WENV180331689
OBLC01000113
175849
Bacillota
GTC
Asp
>WENV180331634
OBLC01000056
175849
Bacillota
GTC
Asp
>WENV180332290
OBLC01132642
280486
Bacillota
TGC
Ala
>WENV180332234
OBLC01103275
280486
Bacillota
TGC
Ala
>WENV180332189
OBLC01065285
280486
Bacillota
TGC
Ala
>WENV180331957
OBLC01005698
280486
Bacillota
TGC
Ala
>WENV180331929
OBLC01003586
280486
Bacillota
TGC
Ala
>WENV180331907
OBLC01002506
280486
Bacillota
TGC
Ala
>WENV180331722
OBLC01000149
56074
Bacillota
TGA
Ser
>WENV180331779
OBLC01000333
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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