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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180360974
OBNU01074996
283221
Gammaproteobacteria
GCC
Gly
>WENV180361103
OBNU01121117
195406
Gammaproteobacteria
ACG
Arg
>WENV180360882
OBNU01047816
178025
Gammaproteobacteria
GAC
Val
>WENV180360860
OBNU01040941
357066
Gammaproteobacteria
TGC
Ala
>WENV180360632
OBNU01006037
282550
Gammaproteobacteria
TAC
Val
>WENV180360476
OBNU01000129
243308
Gammaproteobacteria
TGG
Pro
>WENV180360524
OBNU01000665
281668
Gammaproteobacteria
TTT
Lys
>WENV180360976
OBNU01074996
73481
Gammaproteobacteria
TAA
Leu
>WENV180360451
OBNU01000002
355552
Gammaproteobacteria
TTC
Glu
>WENV180360962
OBNU01071699
283225
Gammaproteobacteria
TGT
Thr
>WENV180361105
OBNU01121528
282632
Gammaproteobacteria
TAC
Val
>WENV180361023
OBNU01088807
8605
Gammaproteobacteria
>WENV180360461
OBNU01000039
282018
Gammaproteobacteria
TGT
Thr
>WENV180360975
OBNU01074996
481250
Gammaproteobacteria
GCA
Cys
>WENV180360899
OBNU01052720
179710
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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