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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180380725
OBOR01010938
400818
Bacteroidota
TTC
Glu
>WENV180380613
OBOR01001440
73133
Bacteroidota
TAA
Leu
>WENV180381110
OBOR01129998
179597
Bacteroidota
GTG
His
>WENV180380795
OBOR01019535
288475
Bacteroidota
GCC
Gly
>WENV180380771
OBOR01015909
120026
Bacteroidota
GTA
Tyr
>WENV180380621
OBOR01001774
23370
Bacteroidota
GGA
Ser
>WENV180381106
OBOR01129168
372872
Bacteroidota
TCC
Gly
>WENV180380772
OBOR01015909
365088
Bacteroidota
TCC
Gly
>WENV180380773
OBOR01016259
240785
Bacteroidota
GTC
Asp
>WENV180381182
OBOR01159459
287318
Bacteroidota
GAA
Phe
>WENV180381459
OBOR01310626
155808
Bacteroidota
TGG
Pro
>WENV180380606
OBOR01001045
227539
Bacteroidota
GTT
Asn
>WENV180380690
OBOR01006333
227539
Bacteroidota
GTT
Asn
>WENV180381463
OBOR01311407
180199
Bacteroidota
CAT
Met
>WENV180381115
OBOR01131472
215303
Bacteroidota
GTC
Asp
>WENV180380631
OBOR01001902
340026
Bacteroidota
CAT
Met
>WENV180381112
OBOR01130757
206043
Bacteroidota
GTC
Asp
>WENV180380589
OBOR01000539
372845
Bacteroidota
CCA
Trp
>WENV180380799
OBOR01019651
118418
Bacteroidota
TAG
Leu
>WENV180380651
OBOR01003240
233847
Bacteroidota
TGC
Ala
>WENV180381454
OBOR01310132
233847
Bacteroidota
TGC
Ala
>WENV180380755
OBOR01014179
183480
Bacteroidota
TGC
Ala
>WENV180380654
OBOR01003323
361792
Bacteroidota
GAA
Phe
>WENV180381226
OBOR01179901
179956
Bacteroidota
GTT
Asn
>WENV180380656
OBOR01003325
156424
Bacteroidota
TGG
Pro
>WENV180380736
OBOR01012287
399343
Bacteroidota
TTC
Glu
>WENV180380616
OBOR01001532
56162
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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