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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180396494
OBPV01009452
402532
Bacteroidota
GCC
Gly
>WENV180396652
OBPV01043812
285360
Bacteroidota
TTT
Lys
>WENV180396551
OBPV01018625
120026
Bacteroidota
GTA
Tyr
>WENV180396622
OBPV01036503
156605
Bacteroidota
GAC
Val
>WENV180396729
OBPV01073515
23370
Bacteroidota
GGA
Ser
>WENV180396499
OBPV01009892
320084
Bacteroidota
TTT
Lys
>WENV180396455
OBPV01005241
155786
Bacteroidota
TGG
Pro
>WENV180396395
OBPV01001679
155808
Bacteroidota
TGG
Pro
>WENV180396541
OBPV01016564
176707
Bacteroidota
TCT
Arg
>WENV180396454
OBPV01005241
74253
Bacteroidota
GCT
Ser
>WENV180396488
OBPV01008551
227539
Bacteroidota
GTT
Asn
>WENV180396448
OBPV01005056
483389
Bacteroidota
GCA
Cys
>WENV180396578
OBPV01023568
200516
Bacteroidota
CAT
Met
>WENV180396502
OBPV01010592
225069
Bacteroidota
TCG
Arg
>WENV180396482
OBPV01008278
347386
Bacteroidota
CCA
Trp
>WENV180396361
OBPV01000210
206043
Bacteroidota
GTC
Asp
>WENV180396716
OBPV01069527
118418
Bacteroidota
TAG
Leu
>WENV180396511
OBPV01012419
118418
Bacteroidota
TAG
Leu
>WENV180396505
OBPV01010884
176817
Bacteroidota
CAT
Met
>WENV180396452
OBPV01005204
403841
Bacteroidota
GCC
Gly
>WENV180396464
OBPV01006779
177901
Bacteroidota
GTT
Asn
>WENV180396442
OBPV01004752
399343
Bacteroidota
TTC
Glu
>WENV180396478
OBPV01008009
399343
Bacteroidota
TTC
Glu
>WENV180396420
OBPV01003163
56162
Bacteroidota
TGA
Ser
>WENV180396745
OBPV01078999
184112
Bacteroidota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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