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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180407694
OBUR01000145
178066
Bacillota
CAT
Met
>WENV180407697
OBUR01000145
178066
Bacillota
CAT
Met
>WENV180407533
OBUR01000005
482407
Bacillota
TCC
Gly
>WENV180407863
OBUR01005657
184537
Bacillota
ACG
Arg
>WENV180407549
OBUR01000007
408526
Bacillota
GCA
Cys
>WENV180407865
OBUR01005759
282753
Bacillota
TAC
Val
>WENV180407794
OBUR01001177
400111
Bacillota
GTT
Asn
>WENV180407866
OBUR01005759
176678
Bacillota
GTC
Asp
>WENV180407729
OBUR01000247
284011
Bacillota
TAC
Val
>WENV180407589
OBUR01000018
296855
Bacillota
GGT
Thr
>WENV180407530
OBUR01000004
48505
Bacillota
TGA
Ser
>WENV180407721
OBUR01000204
29930
Bacillota
GGA
Ser
>WENV180407656
OBUR01000069
20360
Bacillota
TGA
Ser
>WENV180407658
OBUR01000069
20360
Bacillota
TGA
Ser
>WENV180407857
OBUR01004624
282752
Bacillota
TTT
Lys
>WENV180407878
OBUR01008804
282752
Bacillota
TTT
Lys
>WENV180407744
OBUR01000363
291553
Bacillota
GAA
Phe
>WENV180407685
OBUR01000131
487804
Bacillota
GGT
Thr
>WENV180407860
OBUR01005229
140815
Bacillota
TAG
Leu
>WENV180407692
OBUR01000145
50149
Bacillota
TAA
Leu
>WENV180407747
OBUR01000410
280871
Bacillota
GAA
Phe
>WENV180407783
OBUR01000685
280871
Bacillota
GAA
Phe
>WENV180407853
OBUR01003495
280871
Bacillota
GAA
Phe
>WENV180407748
OBUR01000410
400112
Bacillota
GCC
Gly
>WENV180407861
OBUR01005229
400112
Bacillota
GCC
Gly
>WENV180407590
OBUR01000018
184495
Bacillota
CAT
Met
>WENV180407720
OBUR01000197
141202
Bacillota
CAA
Leu
>WENV180407695
OBUR01000145
46663
Bacillota
TAA
Leu
>WENV180407698
OBUR01000145
46663
Bacillota
TAA
Leu
>WENV180407864
OBUR01005759
424271
Bacillota
>WENV180407662
OBUR01000069
29614
Bacillota
GGA
Ser
>WENV180407749
OBUR01000410
480905
Bacillota
TCC
Gly
>WENV180407793
OBUR01000999
480905
Bacillota
TCC
Gly
>WENV180407803
OBUR01001470
480905
Bacillota
TCC
Gly
>WENV180407741
OBUR01000350
282756
Bacillota
CTT
Lys
>WENV180407780
OBUR01000644
100098
Bacillota
GAG
Leu
>WENV180407586
OBUR01000018
289713
Bacillota
TGT
Thr
>WENV180407761
OBUR01000582
302187
Bacillota
CAT
Met
>WENV180407804
OBUR01001470
178067
Bacillota
TCG
Arg
>WENV180407795
OBUR01001194
73395
Bacillota
CAA
Leu
>WENV180407728
OBUR01000247
100097
Bacillota
GTA
Tyr
>WENV180407731
OBUR01000247
100097
Bacillota
GTA
Tyr
>WENV180407733
OBUR01000247
100097
Bacillota
GTA
Tyr
>WENV180407657
OBUR01000069
20361
Bacillota
GCT
Ser
>WENV180407659
OBUR01000069
20361
Bacillota
GCT
Ser
>WENV180407678
OBUR01000102
104114
Bacillota
CAG
Leu
>WENV180407855
OBUR01004624
282757
Bacillota
GTG
His
>WENV180407743
OBUR01000363
280547
Bacillota
GTC
Asp
>WENV180407714
OBUR01000183
289761
Bacillota
TTT
Lys
>WENV180407583
OBUR01000018
289761
Bacillota
TTT
Lys
>WENV180407544
OBUR01000006
289761
Bacillota
TTT
Lys
>WENV180407854
OBUR01004624
176771
Bacillota
TCT
Arg
>WENV180407660
OBUR01000069
178065
Bacillota
ACG
Arg
>WENV180407727
OBUR01000247
282754
Bacillota
TGT
Thr
>WENV180407730
OBUR01000247
282754
Bacillota
TGT
Thr
>WENV180407732
OBUR01000247
282754
Bacillota
TGT
Thr
>WENV180407735
OBUR01000289
282754
Bacillota
TGT
Thr
>WENV180407711
OBUR01000175
282755
Bacillota
GGT
Thr
>WENV180407716
OBUR01000183
289715
Bacillota
TAC
Val
>WENV180407585
OBUR01000018
289715
Bacillota
TAC
Val
>WENV180407756
OBUR01000448
20943
Bacillota
CGA
Ser
>WENV180407820
OBUR01002050
118370
Bacillota
TAG
Leu
>WENV180407532
OBUR01000005
208539
Bacillota
TGG
Pro
>WENV180407534
OBUR01000005
184539
Bacillota
TCT
Arg
>WENV180407856
OBUR01004624
400113
Bacillota
TTG
Gln
>WENV180407661
OBUR01000069
400110
Bacillota
CCT
Arg
>WENV180407788
OBUR01000833
318172
Bacillota
CCA
Trp
>WENV180407792
OBUR01000999
328987
Bacillota
TGG
Pro
>WENV180407655
OBUR01000069
282751
Bacillota
TGC
Ala
>WENV180407796
OBUR01001202
282751
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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