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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180421865
OBVR01007422
408526
Bacillota
GCA
Cys
>WENV180421846
OBVR01002775
48505
Bacillota
TGA
Ser
>WENV180421873
OBVR01009659
289717
Bacillota
CTT
Lys
>WENV180421819
OBVR01000980
339995
Bacillota
TGC
Ala
>WENV180421787
OBVR01000426
182299
Bacillota
CAT
Met
>WENV180421840
OBVR01002053
480337
Bacillota
TCC
Gly
>WENV180421879
OBVR01010112
280547
Bacillota
GTC
Asp
>WENV180421864
OBVR01007422
445407
Bacillota
GCC
Gly
>WENV180421849
OBVR01003065
289761
Bacillota
TTT
Lys
>WENV180421824
OBVR01001203
401835
Bacillota
GCA
Cys
>WENV180421847
OBVR01002782
20943
Bacillota
CGA
Ser
>WENV180421839
OBVR01002053
208539
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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