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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
111 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180427926
OBWB01001166
176499
Actinomycetota
CAT
Met
>WENV180428025
OBWB01002756
176499
Actinomycetota
CAT
Met
>WENV180427823
OBWB01000545
175907
Actinomycetota
TAC
Val
>WENV180428050
OBWB01003606
351841
Actinomycetota
TGC
Ala
>WENV180427981
OBWB01001686
283311
Actinomycetota
CCT
Arg
>WENV180428009
OBWB01002334
449634
Actinomycetota
CTG
Gln
>WENV180428051
OBWB01003722
31036
Actinomycetota
GCT
Ser
>WENV180427794
OBWB01000466
147806
Actinomycetota
TAA
Leu
>WENV180427980
OBWB01001665
280498
Actinomycetota
GTT
Asn
>WENV180427932
OBWB01001187
280498
Actinomycetota
GTT
Asn
>WENV180427931
OBWB01001187
280498
Actinomycetota
GTT
Asn
>WENV180427854
OBWB01000720
280498
Actinomycetota
GTT
Asn
>WENV180427853
OBWB01000720
280498
Actinomycetota
GTT
Asn
>WENV180427852
OBWB01000720
280498
Actinomycetota
GTT
Asn
>WENV180427840
OBWB01000647
316729
Actinomycetota
CAC
Val
>WENV180427959
OBWB01001351
316729
Actinomycetota
CAC
Val
>WENV180427810
OBWB01000501
295964
Actinomycetota
GTT
Asn
>WENV180428061
OBWB01004187
46948
Actinomycetota
>WENV180427902
OBWB01000992
56083
Actinomycetota
CGA
Ser
>WENV180427972
OBWB01001530
140768
Actinomycetota
TAG
Leu
>WENV180427934
OBWB01001195
140768
Actinomycetota
TAG
Leu
>WENV180428019
OBWB01002593
56384
Actinomycetota
TGA
Ser
>WENV180427903
OBWB01000995
176075
Actinomycetota
TCT
Arg
>WENV180427896
OBWB01000965
176075
Actinomycetota
TCT
Arg
>WENV180427998
OBWB01002017
176078
Actinomycetota
GGG
Pro
>WENV180427962
OBWB01001360
20208
Actinomycetota
GAG
Leu
>WENV180427922
OBWB01001147
59689
Actinomycetota
GGA
Ser
>WENV180427745
OBWB01000306
59689
Actinomycetota
GGA
Ser
>WENV180427988
OBWB01001815
175837
Actinomycetota
ACG
Arg
>WENV180427987
OBWB01001815
175837
Actinomycetota
ACG
Arg
>WENV180427967
OBWB01001406
175837
Actinomycetota
ACG
Arg
>WENV180427856
OBWB01000730
175837
Actinomycetota
ACG
Arg
>WENV180427855
OBWB01000730
175837
Actinomycetota
ACG
Arg
>WENV180427935
OBWB01001203
29393
Actinomycetota
GCT
Ser
>WENV180427893
OBWB01000953
280549
Actinomycetota
CAC
Val
>WENV180427953
OBWB01001280
280549
Actinomycetota
CAC
Val
>WENV180428125
OBWB01013506
184493
Actinomycetota
GGG
Pro
>WENV180427849
OBWB01000680
24925
Actinomycetota
GCT
Ser
>WENV180427746
OBWB01000306
349164
Actinomycetota
CTC
Glu
>WENV180427996
OBWB01002004
349164
Actinomycetota
CTC
Glu
>WENV180427806
OBWB01000475
56383
Actinomycetota
CGA
Ser
>WENV180427863
OBWB01000753
280702
Actinomycetota
GGC
Ala
>WENV180427862
OBWB01000753
280702
Actinomycetota
GGC
Ala
>WENV180427887
OBWB01000915
140878
Actinomycetota
TAA
Leu
>WENV180428115
OBWB01011169
6108
Actinomycetota
TAT
Ile
>WENV180427892
OBWB01000953
434162
Actinomycetota
GAC
Val
>WENV180427952
OBWB01001280
434162
Actinomycetota
GAC
Val
>WENV180427916
OBWB01001091
176077
Actinomycetota
CAT
Met
>WENV180427918
OBWB01001099
283312
Actinomycetota
GTG
His
>WENV180428138
OBWB01020048
281635
Actinomycetota
GGC
Ala
>WENV180428057
OBWB01003914
20643
Actinomycetota
GAG
Leu
>WENV180427940
OBWB01001228
280524
Actinomycetota
TGC
Ala
>WENV180427879
OBWB01000867
280524
Actinomycetota
TGC
Ala
>WENV180427912
OBWB01001052
283313
Actinomycetota
CCG
Arg
>WENV180428006
OBWB01002251
398948
Actinomycetota
TTC
Glu
>WENV180427968
OBWB01001415
398948
Actinomycetota
TTC
Glu
>WENV180427942
OBWB01001230
398948
Actinomycetota
TTC
Glu
>WENV180427753
OBWB01000322
150272
Actinomycetota
TAA
Leu
>WENV180427845
OBWB01000666
117777
Actinomycetota
>WENV180428024
OBWB01002756
117777
Actinomycetota
>WENV180427847
OBWB01000674
280523
Actinomycetota
GGC
Ala
>WENV180427885
OBWB01000899
280523
Actinomycetota
GGC
Ala
>WENV180427941
OBWB01001228
280523
Actinomycetota
GGC
Ala
>WENV180427960
OBWB01001351
280523
Actinomycetota
GGC
Ala
>WENV180427846
OBWB01000666
175949
Actinomycetota
CAT
Met
>WENV180427970
OBWB01001518
227544
Actinomycetota
TAC
Val
>WENV180427929
OBWB01001181
176555
Actinomycetota
CAT
Met
>WENV180428067
OBWB01004588
186871
Actinomycetota
CTT
Lys
>WENV180427789
OBWB01000423
191955
Actinomycetota
TGT
Thr
>WENV180428049
OBWB01003606
221845
Actinomycetota
GAT
Ile
>WENV180427963
OBWB01001361
20415
Actinomycetota
GAG
Leu
>WENV180427943
OBWB01001232
280544
Actinomycetota
GTG
His
>WENV180427973
OBWB01001530
280496
Actinomycetota
CGT
Thr
>WENV180427937
OBWB01001214
280703
Actinomycetota
CCT
Arg
>WENV180427975
OBWB01001531
140879
Actinomycetota
TAG
Leu
>WENV180428110
OBWB01010629
285877
Actinomycetota
CCG
Arg
>WENV180428121
OBWB01011405
186868
Actinomycetota
CAA
Leu
>WENV180427911
OBWB01001034
184157
Actinomycetota
TGG
Pro
>WENV180428042
OBWB01003400
178569
Actinomycetota
CAT
Met
>WENV180427961
OBWB01001357
280450
Actinomycetota
TTT
Lys
>WENV180427971
OBWB01001530
323758
Actinomycetota
CGT
Thr
>WENV180427818
OBWB01000521
56166
Actinomycetota
TGA
Ser
>WENV180427924
OBWB01001161
358727
Actinomycetota
CCG
Arg
>WENV180427921
OBWB01001121
358727
Actinomycetota
CCG
Arg
>WENV180427850
OBWB01000689
480329
Actinomycetota
CCC
Gly
>WENV180428035
OBWB01003289
131892
Actinomycetota
GTA
Tyr
>WENV180427835
OBWB01000639
175882
Actinomycetota
TGG
Pro
>WENV180428037
OBWB01003289
180945
Actinomycetota
CAT
Met
>WENV180428000
OBWB01002134
99865
Actinomycetota
CAG
Leu
>WENV180427833
OBWB01000632
99865
Actinomycetota
CAG
Leu
>WENV180427949
OBWB01001262
222475
Actinomycetota
CTT
Lys
>WENV180427811
OBWB01000509
222475
Actinomycetota
CTT
Lys
>WENV180427880
OBWB01000872
480319
Actinomycetota
TTG
Gln
>WENV180428064
OBWB01004425
293249
Actinomycetota
CAC
Val
>WENV180427977
OBWB01001562
280499
Actinomycetota
CCT
Arg
>WENV180427747
OBWB01000306
398853
Actinomycetota
CTG
Gln
>WENV180427997
OBWB01002004
398853
Actinomycetota
CTG
Gln
>WENV180427956
OBWB01001320
175843
Actinomycetota
CAA
Leu
>WENV180427945
OBWB01001239
175843
Actinomycetota
CAA
Leu
>WENV180427718
OBWB01000233
237585
Actinomycetota
TAC
Val
>WENV180428058
OBWB01003981
203883
Actinomycetota
TCT
Arg
>WENV180427741
OBWB01000299
56075
Actinomycetota
TGA
Ser
>WENV180427930
OBWB01001185
46642
Actinomycetota
CGA
Ser
>WENV180427925
OBWB01001166
117903
Actinomycetota
GTA
Tyr
>WENV180427878
OBWB01000867
179238
Actinomycetota
GAT
Ile
>WENV180427861
OBWB01000753
506175
Actinomycetota
TTG
Gln
>WENV180427848
OBWB01000674
506175
Actinomycetota
TTG
Gln
>WENV180427974
OBWB01001531
280470
Actinomycetota
CGT
Thr
>WENV180427933
OBWB01001195
280470
Actinomycetota
CGT
Thr
>WENV180427957
OBWB01001339
480376
Actinomycetota
CCC
Gly
>WENV180427955
OBWB01001292
482493
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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