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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
93 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180435025
OBWL01003294
99852
Bacillota
GTA
Tyr
>WENV180435050
OBWL01003961
99852
Bacillota
GTA
Tyr
>WENV180435110
OBWL01005696
280500
Bacillota
TGC
Ala
>WENV180434370
OBWL01000153
349107
Bacillota
GCC
Gly
>WENV180434851
OBWL01001591
349107
Bacillota
GCC
Gly
>WENV180434931
OBWL01002238
349107
Bacillota
GCC
Gly
>WENV180435166
OBWL01008421
349107
Bacillota
GCC
Gly
>WENV180435167
OBWL01008421
405363
Bacillota
GCA
Cys
>WENV180434463
OBWL01000258
290391
Bacillota
TAC
Val
>WENV180434930
OBWL01002238
280428
Bacillota
GAA
Phe
>WENV180435323
OBWL01030562
176679
Bacillota
TCT
Arg
>WENV180435370
OBWL01060065
179917
Bacillota
CAT
Met
>WENV180434371
OBWL01000153
280466
Bacillota
TAC
Val
>WENV180434837
OBWL01001530
175842
Bacillota
CAC
Val
>WENV180435310
OBWL01028183
287289
Bacillota
GCC
Gly
>WENV180435212
OBWL01012166
228119
Bacillota
TCT
Arg
>WENV180434716
OBWL01000873
228119
Bacillota
TCT
Arg
>WENV180435371
OBWL01060113
348419
Bacillota
GTT
Asn
>WENV180434352
OBWL01000128
184497
Bacillota
GGG
Pro
>WENV180434814
OBWL01001395
179176
Bacillota
ACG
Arg
>WENV180435346
OBWL01039946
46686
Bacillota
TAA
Leu
>WENV180434819
OBWL01001432
215243
Bacillota
CAT
Met
>WENV180434934
OBWL01002289
190476
Bacillota
CAT
Met
>WENV180435274
OBWL01020686
176014
Bacillota
TCT
Arg
>WENV180435100
OBWL01005525
280447
Bacillota
GAC
Val
>WENV180435005
OBWL01003092
280447
Bacillota
GAC
Val
>WENV180434972
OBWL01002726
5692
Bacillota
GCT
Ser
>WENV180434860
OBWL01001626
73009
Bacillota
CAG
Leu
>WENV180434594
OBWL01000561
73009
Bacillota
CAG
Leu
>WENV180435359
OBWL01050568
407726
Bacillota
CTG
Gln
>WENV180435021
OBWL01003256
291581
Bacillota
CGG
Pro
>WENV180435352
OBWL01041277
398835
Bacillota
GCC
Gly
>WENV180435324
OBWL01030562
330433
Bacillota
GTG
His
>WENV180435285
OBWL01022832
175831
Bacillota
ACG
Arg
>WENV180435151
OBWL01007420
295350
Bacillota
TGC
Ala
>WENV180435259
OBWL01019059
187390
Bacillota
CGG
Pro
>WENV180435020
OBWL01003256
480322
Bacillota
CTG
Gln
>WENV180434827
OBWL01001458
480322
Bacillota
CTG
Gln
>WENV180434548
OBWL01000433
401685
Bacillota
TTG
Gln
>WENV180435014
OBWL01003197
175868
Bacillota
GTT
Asn
>WENV180434612
OBWL01000602
175868
Bacillota
GTT
Asn
>WENV180435034
OBWL01003648
322848
Bacillota
CTT
Lys
>WENV180435033
OBWL01003648
398854
Bacillota
CTC
Glu
>WENV180434611
OBWL01000602
398854
Bacillota
CTC
Glu
>WENV180435049
OBWL01003906
291576
Bacillota
CCC
Gly
>WENV180435106
OBWL01005601
497729
Bacillota
CCA
Trp
>WENV180434964
OBWL01002581
497729
Bacillota
CCA
Trp
>WENV180434948
OBWL01002432
497729
Bacillota
CCA
Trp
>WENV180434610
OBWL01000596
497729
Bacillota
CCA
Trp
>WENV180435368
OBWL01059977
180688
Bacillota
GTC
Asp
>WENV180435137
OBWL01006649
303718
Bacillota
TGT
Thr
>WENV180435003
OBWL01003081
175911
Bacillota
GTC
Asp
>WENV180435308
OBWL01028183
175911
Bacillota
GTC
Asp
>WENV180435163
OBWL01007912
292374
Bacillota
TGC
Ala
>WENV180435381
OBWL01061331
398857
Bacillota
TTC
Glu
>WENV180435277
OBWL01021887
280444
Bacillota
GGT
Thr
>WENV180434824
OBWL01001442
280444
Bacillota
GGT
Thr
>WENV180435326
OBWL01030562
354380
Bacillota
TTT
Lys
>WENV180435278
OBWL01022351
291597
Bacillota
TGC
Ala
>WENV180434936
OBWL01002316
179755
Bacillota
CCG
Arg
>WENV180434735
OBWL01000983
58120
Bacillota
AAG
Leu
>WENV180434508
OBWL01000336
58120
Bacillota
AAG
Leu
>WENV180435246
OBWL01016932
46835
Bacillota
TAA
Leu
>WENV180434742
OBWL01001007
330413
Bacillota
CTT
Lys
>WENV180434935
OBWL01002289
398832
Bacillota
TTC
Glu
>WENV180435316
OBWL01029254
175915
Bacillota
GTC
Asp
>WENV180434874
OBWL01001715
175915
Bacillota
GTC
Asp
>WENV180435215
OBWL01012166
280476
Bacillota
TTT
Lys
>WENV180434810
OBWL01001380
280476
Bacillota
TTT
Lys
>WENV180434769
OBWL01001127
280476
Bacillota
TTT
Lys
>WENV180434506
OBWL01000335
280476
Bacillota
TTT
Lys
>WENV180435318
OBWL01029254
118359
Bacillota
GTA
Tyr
>WENV180435162
OBWL01007912
201856
Bacillota
GAT
Ile
>WENV180435153
OBWL01007448
201856
Bacillota
GAT
Ile
>WENV180435317
OBWL01029254
321248
Bacillota
TAC
Val
>WENV180434852
OBWL01001592
321248
Bacillota
TAC
Val
>WENV180434651
OBWL01000686
321248
Bacillota
TAC
Val
>WENV180434279
OBWL01000046
321248
Bacillota
TAC
Val
>WENV180434277
OBWL01000046
321248
Bacillota
TAC
Val
>WENV180435349
OBWL01040507
280483
Bacillota
GAA
Phe
>WENV180435000
OBWL01003081
298260
Bacillota
GTT
Asn
>WENV180434547
OBWL01000433
175857
Bacillota
GTG
His
>WENV180435350
OBWL01040507
285756
Bacillota
GCC
Gly
>WENV180435099
OBWL01005498
398833
Bacillota
TGT
Thr
>WENV180434384
OBWL01000168
285556
Bacillota
TGT
Thr
>WENV180434932
OBWL01002238
175849
Bacillota
GTC
Asp
>WENV180434823
OBWL01001442
175849
Bacillota
GTC
Asp
>WENV180434372
OBWL01000153
175849
Bacillota
GTC
Asp
>WENV180435325
OBWL01030562
399264
Bacillota
TTG
Gln
>WENV180434807
OBWL01001380
179166
Bacillota
TCT
Arg
>WENV180435305
OBWL01027366
280486
Bacillota
TGC
Ala
>WENV180434971
OBWL01002726
56074
Bacillota
TGA
Ser
>WENV180434800
OBWL01001346
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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