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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180439687
OBWT01003275
183770
Fusobacteriota
GAT
Ile
>WENV180439811
OBWT01018896
187804
Fusobacteriota
GTC
Asp
>WENV180439727
OBWT01006236
141145
Fusobacteriota
>WENV180439810
OBWT01018896
288879
Fusobacteriota
TAC
Val
>WENV180439723
OBWT01006236
280538
Fusobacteriota
TTT
Lys
>WENV180439688
OBWT01003275
183767
Fusobacteriota
TGC
Ala
>WENV180439725
OBWT01006236
156979
Fusobacteriota
CAT
Met
>WENV180439807
OBWT01018401
143640
Fusobacteriota
TAG
Leu
>WENV180439832
OBWT01029493
358658
Fusobacteriota
GTG
His
>WENV180439726
OBWT01006236
407549
Fusobacteriota
TTC
Glu
>WENV180439724
OBWT01006236
183769
Fusobacteriota
TCT
Arg
>WENV180439721
OBWT01006236
202720
Fusobacteriota
TGG
Pro
>WENV180439820
OBWT01022766
192090
Fusobacteriota
CAT
Met
>WENV180439831
OBWT01029491
288880
Fusobacteriota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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