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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180484399
OBZI01000162
179231
Actinomycetota
TAC
Val
>WENV180484423
OBZI01000187
176499
Actinomycetota
CAT
Met
>WENV180484574
OBZI01000494
175907
Actinomycetota
TAC
Val
>WENV180484510
OBZI01000314
349003
Actinomycetota
CCG
Arg
>WENV180484604
OBZI01000613
349003
Actinomycetota
CCG
Arg
>WENV180484515
OBZI01000338
147806
Actinomycetota
TAA
Leu
>WENV180484465
OBZI01000256
280498
Actinomycetota
GTT
Asn
>WENV180484464
OBZI01000256
280498
Actinomycetota
GTT
Asn
>WENV180484631
OBZI01000821
295964
Actinomycetota
GTT
Asn
>WENV180484555
OBZI01000448
295964
Actinomycetota
GTT
Asn
>WENV180484467
OBZI01000256
295964
Actinomycetota
GTT
Asn
>WENV180484598
OBZI01000598
56083
Actinomycetota
CGA
Ser
>WENV180484493
OBZI01000291
140768
Actinomycetota
TAG
Leu
>WENV180484355
OBZI01000116
140768
Actinomycetota
TAG
Leu
>WENV180484554
OBZI01000444
176075
Actinomycetota
TCT
Arg
>WENV180484490
OBZI01000280
175848
Actinomycetota
TGG
Pro
>WENV180484512
OBZI01000318
176078
Actinomycetota
GGG
Pro
>WENV180484544
OBZI01000437
482604
Actinomycetota
TTG
Gln
>WENV180484617
OBZI01000712
59689
Actinomycetota
GGA
Ser
>WENV180484655
OBZI01001004
175837
Actinomycetota
ACG
Arg
>WENV180484654
OBZI01001004
175837
Actinomycetota
ACG
Arg
>WENV180484273
OBZI01000033
175837
Actinomycetota
ACG
Arg
>WENV180484272
OBZI01000033
175837
Actinomycetota
ACG
Arg
>WENV180484621
OBZI01000756
29393
Actinomycetota
GCT
Ser
>WENV180484670
OBZI01001089
280549
Actinomycetota
CAC
Val
>WENV180484599
OBZI01000605
349164
Actinomycetota
CTC
Glu
>WENV180484546
OBZI01000437
280702
Actinomycetota
GGC
Ala
>WENV180484545
OBZI01000437
280702
Actinomycetota
GGC
Ala
>WENV180484553
OBZI01000440
176077
Actinomycetota
CAT
Met
>WENV180484704
OBZI01001532
21508
Actinomycetota
GAG
Leu
>WENV180484434
OBZI01000205
176638
Actinomycetota
GGG
Pro
>WENV180484753
OBZI01003788
285876
Actinomycetota
CGT
Thr
>WENV180484499
OBZI01000296
280524
Actinomycetota
TGC
Ala
>WENV180484417
OBZI01000181
280524
Actinomycetota
TGC
Ala
>WENV180484589
OBZI01000556
398948
Actinomycetota
TTC
Glu
>WENV180484572
OBZI01000482
150272
Actinomycetota
TAA
Leu
>WENV180484618
OBZI01000725
117777
Actinomycetota
>WENV180484466
OBZI01000256
280523
Actinomycetota
GGC
Ala
>WENV180484418
OBZI01000181
280523
Actinomycetota
GGC
Ala
>WENV180484619
OBZI01000725
175949
Actinomycetota
CAT
Met
>WENV180484391
OBZI01000152
176555
Actinomycetota
CAT
Met
>WENV180484542
OBZI01000411
191955
Actinomycetota
TGT
Thr
>WENV180484500
OBZI01000298
280544
Actinomycetota
GTG
His
>WENV180484494
OBZI01000291
280496
Actinomycetota
CGT
Thr
>WENV180484468
OBZI01000259
280703
Actinomycetota
CCT
Arg
>WENV180484345
OBZI01000108
280450
Actinomycetota
TTT
Lys
>WENV180484492
OBZI01000291
323758
Actinomycetota
CGT
Thr
>WENV180484320
OBZI01000081
56166
Actinomycetota
TGA
Ser
>WENV180484581
OBZI01000535
480329
Actinomycetota
CCC
Gly
>WENV180484421
OBZI01000184
175882
Actinomycetota
TGG
Pro
>WENV180484616
OBZI01000707
99865
Actinomycetota
CAG
Leu
>WENV180484556
OBZI01000449
222475
Actinomycetota
CTT
Lys
>WENV180484570
OBZI01000476
480319
Actinomycetota
TTG
Gln
>WENV180484328
OBZI01000088
280499
Actinomycetota
CCT
Arg
>WENV180484600
OBZI01000605
398853
Actinomycetota
CTG
Gln
>WENV180484462
OBZI01000249
398853
Actinomycetota
CTG
Gln
>WENV180484420
OBZI01000184
176642
Actinomycetota
CAA
Leu
>WENV180484489
OBZI01000280
175843
Actinomycetota
CAA
Leu
>WENV180484502
OBZI01000301
203883
Actinomycetota
TCT
Arg
>WENV180484666
OBZI01001073
56075
Actinomycetota
TGA
Ser
>WENV180484322
OBZI01000081
46642
Actinomycetota
CGA
Ser
>WENV180484459
OBZI01000241
104211
Actinomycetota
CAG
Leu
>WENV180484755
OBZI01003931
176507
Actinomycetota
CAT
Met
>WENV180484422
OBZI01000187
117903
Actinomycetota
GTA
Tyr
>WENV180484498
OBZI01000296
179238
Actinomycetota
GAT
Ile
>WENV180484354
OBZI01000116
280470
Actinomycetota
CGT
Thr
>WENV180484692
OBZI01001397
480376
Actinomycetota
CCC
Gly
>WENV180484756
OBZI01003976
442299
Actinomycetota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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