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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180484216
OBZI01000009
184537
Bacillota
ACG
Arg
>WENV180484815
OBZI01011882
408526
Bacillota
GCA
Cys
>WENV180484360
OBZI01000117
179917
Bacillota
CAT
Met
>WENV180484740
OBZI01002640
296855
Bacillota
GGT
Thr
>WENV180484488
OBZI01000271
48505
Bacillota
TGA
Ser
>WENV180484729
OBZI01002397
48505
Bacillota
TGA
Ser
>WENV180484637
OBZI01000854
183994
Bacillota
TCT
Arg
>WENV180484709
OBZI01001655
231532
Bacillota
ACG
Arg
>WENV180484708
OBZI01001655
291629
Bacillota
CCA
Trp
>WENV180484528
OBZI01000385
348419
Bacillota
GTT
Asn
>WENV180484371
OBZI01000138
348419
Bacillota
GTT
Asn
>WENV180484319
OBZI01000080
184497
Bacillota
GGG
Pro
>WENV180484219
OBZI01000009
289717
Bacillota
CTT
Lys
>WENV180484825
OBZI01015568
407852
Bacillota
TTC
Glu
>WENV180484772
OBZI01004754
400752
Bacillota
GTT
Asn
>WENV180484744
OBZI01002882
20932
Bacillota
GCT
Ser
>WENV180484384
OBZI01000144
20932
Bacillota
GCT
Ser
>WENV180484644
OBZI01000906
291553
Bacillota
GAA
Phe
>WENV180484517
OBZI01000342
291553
Bacillota
GAA
Phe
>WENV180484225
OBZI01000012
291553
Bacillota
GAA
Phe
>WENV180484463
OBZI01000252
482593
Bacillota
CCC
Gly
>WENV180484796
OBZI01007329
339995
Bacillota
TGC
Ala
>WENV180484231
OBZI01000012
20942
Bacillota
GGA
Ser
>WENV180484750
OBZI01003383
287643
Bacillota
TAC
Val
>WENV180484291
OBZI01000046
144756
Bacillota
GTA
Tyr
>WENV180484563
OBZI01000450
144756
Bacillota
GTA
Tyr
>WENV180484741
OBZI01002640
184495
Bacillota
CAT
Met
>WENV180484830
OBZI01020757
141202
Bacillota
CAA
Leu
>WENV180484758
OBZI01003992
332864
Bacillota
CTT
Lys
>WENV180484824
OBZI01015568
20502
Bacillota
GCT
Ser
>WENV180484768
OBZI01004066
284107
Bacillota
CGC
Ala
>WENV180484737
OBZI01002640
289713
Bacillota
TGT
Thr
>WENV180484807
OBZI01010020
179263
Bacillota
TCT
Arg
>WENV180484791
OBZI01007042
284886
Bacillota
TGT
Thr
>WENV180484793
OBZI01007042
238199
Bacillota
ACG
Arg
>WENV180484789
OBZI01006854
404091
Bacillota
TTG
Gln
>WENV180484412
OBZI01000175
401685
Bacillota
TTG
Gln
>WENV180484788
OBZI01006854
289716
Bacillota
GTG
His
>WENV180484719
OBZI01002061
497729
Bacillota
CCA
Trp
>WENV180484449
OBZI01000230
497729
Bacillota
CCA
Trp
>WENV180484820
OBZI01012844
323864
Bacillota
TGC
Ala
>WENV180484661
OBZI01001043
432453
Bacillota
TTC
Glu
>WENV180484228
OBZI01000012
480337
Bacillota
TCC
Gly
>WENV180484699
OBZI01001516
404126
Bacillota
GCC
Gly
>WENV180484529
OBZI01000385
398857
Bacillota
TTC
Glu
>WENV180484372
OBZI01000138
398857
Bacillota
TTC
Glu
>WENV180484217
OBZI01000009
119459
Bacillota
TAG
Leu
>WENV180484812
OBZI01010743
400626
Bacillota
CCG
Arg
>WENV180484797
OBZI01007354
291597
Bacillota
TGC
Ala
>WENV180484690
OBZI01001396
179845
Bacillota
CGG
Pro
>WENV180484659
OBZI01001043
333281
Bacillota
GTT
Asn
>WENV180484643
OBZI01000906
280547
Bacillota
GTC
Asp
>WENV180484516
OBZI01000342
280547
Bacillota
GTC
Asp
>WENV180484224
OBZI01000012
280547
Bacillota
GTC
Asp
>WENV180484536
OBZI01000395
58120
Bacillota
AAG
Leu
>WENV180484297
OBZI01000053
58120
Bacillota
AAG
Leu
>WENV180484742
OBZI01002692
289154
Bacillota
CTT
Lys
>WENV180484790
OBZI01006854
289761
Bacillota
TTT
Lys
>WENV180484660
OBZI01001043
289761
Bacillota
TTT
Lys
>WENV180484377
OBZI01000138
46835
Bacillota
TAA
Leu
>WENV180484481
OBZI01000261
320075
Bacillota
GAA
Phe
>WENV180484662
OBZI01001043
289715
Bacillota
TAC
Val
>WENV180484806
OBZI01009356
332651
Bacillota
GTT
Asn
>WENV180484693
OBZI01001409
20943
Bacillota
CGA
Ser
>WENV180484230
OBZI01000012
20943
Bacillota
CGA
Ser
>WENV180484227
OBZI01000012
208539
Bacillota
TGG
Pro
>WENV180484229
OBZI01000012
184539
Bacillota
TCT
Arg
>WENV180484622
OBZI01000764
183995
Bacillota
GGG
Pro
>WENV180484411
OBZI01000175
175857
Bacillota
GTG
His
>WENV180484614
OBZI01000701
403766
Bacillota
TTG
Gln
>WENV180484774
OBZI01005128
408869
Bacillota
CTC
Glu
>WENV180484336
OBZI01000093
317820
Bacillota
TAC
Val
>WENV180484427
OBZI01000199
317820
Bacillota
TAC
Val
>WENV180484773
OBZI01005059
481173
Bacillota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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