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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
107 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180495657
OCAB01000199
179231
Actinomycetota
TAC
Val
>WENV180495616
OCAB01000134
176499
Actinomycetota
CAT
Met
>WENV180495655
OCAB01000193
176499
Actinomycetota
CAT
Met
>WENV180495598
OCAB01000117
175907
Actinomycetota
TAC
Val
>WENV180495666
OCAB01000225
283311
Actinomycetota
CCT
Arg
>WENV180495566
OCAB01000076
280498
Actinomycetota
GTT
Asn
>WENV180495567
OCAB01000076
280498
Actinomycetota
GTT
Asn
>WENV180495592
OCAB01000104
280498
Actinomycetota
GTT
Asn
>WENV180495555
OCAB01000070
316729
Actinomycetota
CAC
Val
>WENV180495618
OCAB01000136
316729
Actinomycetota
CAC
Val
>WENV180495488
OCAB01000022
295964
Actinomycetota
GTT
Asn
>WENV180495694
OCAB01000361
295964
Actinomycetota
GTT
Asn
>WENV180495695
OCAB01000361
295964
Actinomycetota
GTT
Asn
>WENV180495769
OCAB01008443
295964
Actinomycetota
GTT
Asn
>WENV180495550
OCAB01000061
56083
Actinomycetota
CGA
Ser
>WENV180495685
OCAB01000309
140768
Actinomycetota
TAG
Leu
>WENV180495707
OCAB01000426
140768
Actinomycetota
TAG
Leu
>WENV180495559
OCAB01000071
56384
Actinomycetota
TGA
Ser
>WENV180495614
OCAB01000133
176075
Actinomycetota
TCT
Arg
>WENV180495675
OCAB01000261
176075
Actinomycetota
TCT
Arg
>WENV180495492
OCAB01000025
175848
Actinomycetota
TGG
Pro
>WENV180495636
OCAB01000157
176078
Actinomycetota
GGG
Pro
>WENV180495557
OCAB01000070
176078
Actinomycetota
GGG
Pro
>WENV180495591
OCAB01000102
20208
Actinomycetota
GAG
Leu
>WENV180495681
OCAB01000308
482604
Actinomycetota
TTG
Gln
>WENV180495484
OCAB01000022
482604
Actinomycetota
TTG
Gln
>WENV180495740
OCAB01002408
59689
Actinomycetota
GGA
Ser
>WENV180495652
OCAB01000189
59689
Actinomycetota
GGA
Ser
>WENV180495808
OCAB01022539
175837
Actinomycetota
ACG
Arg
>WENV180495647
OCAB01000180
175837
Actinomycetota
ACG
Arg
>WENV180495646
OCAB01000180
175837
Actinomycetota
ACG
Arg
>WENV180495639
OCAB01000164
175837
Actinomycetota
ACG
Arg
>WENV180495638
OCAB01000164
175837
Actinomycetota
ACG
Arg
>WENV180495549
OCAB01000061
29393
Actinomycetota
GCT
Ser
>WENV180495604
OCAB01000123
280549
Actinomycetota
CAC
Val
>WENV180495634
OCAB01000157
280549
Actinomycetota
CAC
Val
>WENV180495625
OCAB01000141
187349
Actinomycetota
TGG
Pro
>WENV180495558
OCAB01000071
56383
Actinomycetota
CGA
Ser
>WENV180495683
OCAB01000308
280702
Actinomycetota
GGC
Ala
>WENV180495682
OCAB01000308
280702
Actinomycetota
GGC
Ala
>WENV180495698
OCAB01000390
140878
Actinomycetota
TAA
Leu
>WENV180495658
OCAB01000200
176077
Actinomycetota
CAT
Met
>WENV180495534
OCAB01000052
283312
Actinomycetota
GTG
His
>WENV180495565
OCAB01000076
176638
Actinomycetota
GGG
Pro
>WENV180495701
OCAB01000401
280524
Actinomycetota
TGC
Ala
>WENV180495609
OCAB01000128
280524
Actinomycetota
TGC
Ala
>WENV180495537
OCAB01000053
280524
Actinomycetota
TGC
Ala
>WENV180495521
OCAB01000043
283313
Actinomycetota
CCG
Arg
>WENV180495728
OCAB01000738
398948
Actinomycetota
TTC
Glu
>WENV180495798
OCAB01017123
291585
Actinomycetota
GCC
Gly
>WENV180495493
OCAB01000025
150272
Actinomycetota
TAA
Leu
>WENV180495547
OCAB01000061
117777
Actinomycetota
>WENV180495654
OCAB01000193
117777
Actinomycetota
>WENV180495680
OCAB01000302
280523
Actinomycetota
GGC
Ala
>WENV180495619
OCAB01000136
280523
Actinomycetota
GGC
Ala
>WENV180495610
OCAB01000128
280523
Actinomycetota
GGC
Ala
>WENV180495489
OCAB01000022
280523
Actinomycetota
GGC
Ala
>WENV180495548
OCAB01000061
175949
Actinomycetota
CAT
Met
>WENV180495633
OCAB01000157
418252
Actinomycetota
GAC
Val
>WENV180495603
OCAB01000123
418252
Actinomycetota
GAC
Val
>WENV180495673
OCAB01000251
191955
Actinomycetota
TGT
Thr
>WENV180495770
OCAB01008547
180071
Actinomycetota
CAT
Met
>WENV180495545
OCAB01000060
175841
Actinomycetota
TAT
Ile
>WENV180495540
OCAB01000056
20415
Actinomycetota
GAG
Leu
>WENV180495595
OCAB01000108
280544
Actinomycetota
GTG
His
>WENV180495686
OCAB01000309
280496
Actinomycetota
CGT
Thr
>WENV180495544
OCAB01000060
175872
Actinomycetota
GTC
Asp
>WENV180495562
OCAB01000073
280703
Actinomycetota
CCT
Arg
>WENV180495679
OCAB01000301
140879
Actinomycetota
TAG
Leu
>WENV180495656
OCAB01000193
20205
Actinomycetota
GCT
Ser
>WENV180495626
OCAB01000142
20205
Actinomycetota
GCT
Ser
>WENV180495714
OCAB01000481
178569
Actinomycetota
CAT
Met
>WENV180495703
OCAB01000403
280450
Actinomycetota
TTT
Lys
>WENV180495672
OCAB01000249
280450
Actinomycetota
TTT
Lys
>WENV180495628
OCAB01000146
280450
Actinomycetota
TTT
Lys
>WENV180495613
OCAB01000132
200581
Actinomycetota
CAT
Met
>WENV180495630
OCAB01000154
480329
Actinomycetota
CCC
Gly
>WENV180495564
OCAB01000075
480329
Actinomycetota
CCC
Gly
>WENV180495506
OCAB01000033
175882
Actinomycetota
TGG
Pro
>WENV180495504
OCAB01000033
20209
Actinomycetota
GAG
Leu
>WENV180495785
OCAB01012430
284887
Actinomycetota
GCC
Gly
>WENV180495705
OCAB01000419
99865
Actinomycetota
CAG
Leu
>WENV180495563
OCAB01000075
99865
Actinomycetota
CAG
Leu
>WENV180495716
OCAB01000525
480319
Actinomycetota
TTG
Gln
>WENV180495663
OCAB01000213
280499
Actinomycetota
CCT
Arg
>WENV180495727
OCAB01000685
398853
Actinomycetota
CTG
Gln
>WENV180495552
OCAB01000064
398853
Actinomycetota
CTG
Gln
>WENV180495624
OCAB01000141
175843
Actinomycetota
CAA
Leu
>WENV180495505
OCAB01000033
175843
Actinomycetota
CAA
Leu
>WENV180495494
OCAB01000025
175843
Actinomycetota
CAA
Leu
>WENV180495696
OCAB01000381
203883
Actinomycetota
TCT
Arg
>WENV180495724
OCAB01000613
56075
Actinomycetota
TGA
Ser
>WENV180495623
OCAB01000140
46642
Actinomycetota
CGA
Ser
>WENV180495606
OCAB01000127
104211
Actinomycetota
CAG
Leu
>WENV180495677
OCAB01000292
317680
Actinomycetota
CCG
Arg
>WENV180495726
OCAB01000685
289788
Actinomycetota
CTC
Glu
>WENV180495615
OCAB01000134
117903
Actinomycetota
GTA
Tyr
>WENV180495621
OCAB01000140
56071
Actinomycetota
TGA
Ser
>WENV180495700
OCAB01000401
179238
Actinomycetota
GAT
Ile
>WENV180495539
OCAB01000055
147796
Actinomycetota
TAA
Leu
>WENV180495706
OCAB01000426
280470
Actinomycetota
CGT
Thr
>WENV180495684
OCAB01000309
280470
Actinomycetota
CGT
Thr
>WENV180495678
OCAB01000301
280470
Actinomycetota
CGT
Thr
>WENV180495697
OCAB01000383
480376
Actinomycetota
CCC
Gly
>WENV180495523
OCAB01000043
200276
Actinomycetota
CTT
Lys
>WENV180495671
OCAB01000245
200276
Actinomycetota
CTT
Lys
>WENV180495589
OCAB01000094
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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