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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
140 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180518591
OCHD01090011
200563
Bacillota
TGG
Pro
>WENV180518547
OCHD01078452
212982
Bacillota
ACG
Arg
>WENV180518174
OCHD01009138
343590
Bacillota
GCC
Gly
>WENV180518355
OCHD01028407
234991
Bacillota
GAT
Ile
>WENV180518277
OCHD01017758
280500
Bacillota
TGC
Ala
>WENV180518572
OCHD01085162
280500
Bacillota
TGC
Ala
>WENV180518586
OCHD01089339
349107
Bacillota
GCC
Gly
>WENV180518374
OCHD01030473
349107
Bacillota
GCC
Gly
>WENV180518001
OCHD01004794
349107
Bacillota
GCC
Gly
>WENV180517682
OCHD01001237
349107
Bacillota
GCC
Gly
>WENV180518456
OCHD01046218
480520
Bacillota
TCC
Gly
>WENV180518375
OCHD01030473
405363
Bacillota
GCA
Cys
>WENV180518650
OCHD01158184
280428
Bacillota
GAA
Phe
>WENV180518491
OCHD01055616
280428
Bacillota
GAA
Phe
>WENV180518004
OCHD01004794
280428
Bacillota
GAA
Phe
>WENV180517999
OCHD01004776
280428
Bacillota
GAA
Phe
>WENV180517012
OCHD01000037
280428
Bacillota
GAA
Phe
>WENV180517453
OCHD01000517
229015
Bacillota
GTG
His
>WENV180518607
OCHD01097640
179917
Bacillota
CAT
Met
>WENV180517211
OCHD01000162
179917
Bacillota
CAT
Met
>WENV180517122
OCHD01000090
179917
Bacillota
CAT
Met
>WENV180518391
OCHD01033787
176678
Bacillota
GTC
Asp
>WENV180518588
OCHD01089508
280466
Bacillota
TAC
Val
>WENV180518515
OCHD01069294
280466
Bacillota
TAC
Val
>WENV180518002
OCHD01004794
280466
Bacillota
TAC
Val
>WENV180517874
OCHD01002969
280492
Bacillota
CTT
Lys
>WENV180517714
OCHD01001422
280492
Bacillota
CTT
Lys
>WENV180518154
OCHD01007982
175842
Bacillota
CAC
Val
>WENV180517494
OCHD01000588
175842
Bacillota
CAC
Val
>WENV180517373
OCHD01000375
291629
Bacillota
CCA
Trp
>WENV180518546
OCHD01078452
46774
Bacillota
TAA
Leu
>WENV180518211
OCHD01011199
236579
Bacillota
GAT
Ile
>WENV180518488
OCHD01054321
184497
Bacillota
GGG
Pro
>WENV180518217
OCHD01011322
179176
Bacillota
ACG
Arg
>WENV180518210
OCHD01011199
295166
Bacillota
TGC
Ala
>WENV180518454
OCHD01046218
141334
Bacillota
TAG
Leu
>WENV180518575
OCHD01086174
215243
Bacillota
CAT
Met
>WENV180517877
OCHD01003018
190476
Bacillota
CAT
Met
>WENV180518254
OCHD01014708
280447
Bacillota
GAC
Val
>WENV180517639
OCHD01001041
280447
Bacillota
GAC
Val
>WENV180518173
OCHD01009084
5692
Bacillota
GCT
Ser
>WENV180518131
OCHD01007469
5692
Bacillota
GCT
Ser
>WENV180517305
OCHD01000271
312274
Bacillota
GGC
Ala
>WENV180517275
OCHD01000242
186123
Bacillota
GTC
Asp
>WENV180518183
OCHD01009580
175825
Bacillota
GAT
Ile
>WENV180518141
OCHD01007682
175825
Bacillota
GAT
Ile
>WENV180517010
OCHD01000037
280427
Bacillota
TAC
Val
>WENV180518582
OCHD01087426
284723
Bacillota
TAC
Val
>WENV180518213
OCHD01011213
73009
Bacillota
CAG
Leu
>WENV180518506
OCHD01062124
399266
Bacillota
>WENV180518292
OCHD01019212
280646
Bacillota
TGC
Ala
>WENV180518295
OCHD01020219
189473
Bacillota
GAT
Ile
>WENV180517697
OCHD01001327
291581
Bacillota
CGG
Pro
>WENV180518191
OCHD01010136
175859
Bacillota
TCT
Arg
>WENV180518182
OCHD01009580
280436
Bacillota
TGC
Ala
>WENV180518451
OCHD01046218
330433
Bacillota
GTG
His
>WENV180518642
OCHD01157341
175831
Bacillota
ACG
Arg
>WENV180517397
OCHD01000432
332181
Bacillota
TGT
Thr
>WENV180517452
OCHD01000517
179810
Bacillota
TCT
Arg
>WENV180517284
OCHD01000254
179810
Bacillota
TCT
Arg
>WENV180517728
OCHD01001553
284627
Bacillota
GAA
Phe
>WENV180517418
OCHD01000458
284627
Bacillota
GAA
Phe
>WENV180517276
OCHD01000242
291634
Bacillota
GAA
Phe
>WENV180517895
OCHD01003171
346451
Bacillota
TTT
Lys
>WENV180518314
OCHD01022595
480322
Bacillota
CTG
Gln
>WENV180518166
OCHD01008764
480322
Bacillota
CTG
Gln
>WENV180517696
OCHD01001327
480322
Bacillota
CTG
Gln
>WENV180518480
OCHD01050514
175868
Bacillota
GTT
Asn
>WENV180518238
OCHD01013167
175868
Bacillota
GTT
Asn
>WENV180517840
OCHD01002547
175868
Bacillota
GTT
Asn
>WENV180517578
OCHD01000775
175868
Bacillota
GTT
Asn
>WENV180517541
OCHD01000680
322848
Bacillota
CTT
Lys
>WENV180518325
OCHD01024236
398854
Bacillota
CTC
Glu
>WENV180518237
OCHD01013167
398854
Bacillota
CTC
Glu
>WENV180517839
OCHD01002547
398854
Bacillota
CTC
Glu
>WENV180517694
OCHD01001289
291576
Bacillota
CCC
Gly
>WENV180518111
OCHD01006832
480324
Bacillota
TTG
Gln
>WENV180518027
OCHD01005331
497729
Bacillota
CCA
Trp
>WENV180518326
OCHD01024326
175899
Bacillota
GTC
Asp
>WENV180518235
OCHD01012981
56079
Bacillota
AAG
Leu
>WENV180517603
OCHD01000882
56079
Bacillota
AAG
Leu
>WENV180518256
OCHD01014730
186051
Bacillota
GAT
Ile
>WENV180517198
OCHD01000150
398857
Bacillota
TTC
Glu
>WENV180518074
OCHD01006049
204381
Bacillota
GAT
Ile
>WENV180517942
OCHD01003848
117745
Bacillota
GTA
Tyr
>WENV180517721
OCHD01001519
117745
Bacillota
GTA
Tyr
>WENV180518485
OCHD01053527
280444
Bacillota
GGT
Thr
>WENV180518357
OCHD01028866
280444
Bacillota
GGT
Thr
>WENV180517647
OCHD01001069
280444
Bacillota
GGT
Thr
>WENV180517493
OCHD01000588
280444
Bacillota
GGT
Thr
>WENV180518453
OCHD01046218
354380
Bacillota
TTT
Lys
>WENV180518428
OCHD01039887
291597
Bacillota
TGC
Ala
>WENV180518584
OCHD01087583
46643
Bacillota
TGA
Ser
>WENV180517817
OCHD01002284
46643
Bacillota
TGA
Ser
>WENV180517806
OCHD01002147
46643
Bacillota
TGA
Ser
>WENV180517081
OCHD01000067
223045
Bacillota
GAT
Ile
>WENV180518346
OCHD01026293
179755
Bacillota
CCG
Arg
>WENV180518114
OCHD01007030
179755
Bacillota
CCG
Arg
>WENV180518294
OCHD01019817
58120
Bacillota
AAG
Leu
>WENV180518356
OCHD01028407
291650
Bacillota
TGC
Ala
>WENV180518311
OCHD01022221
46835
Bacillota
TAA
Leu
>WENV180517878
OCHD01003018
398832
Bacillota
TTC
Glu
>WENV180518571
OCHD01085030
203851
Bacillota
TCT
Arg
>WENV180518221
OCHD01011656
118669
Bacillota
GTA
Tyr
>WENV180518036
OCHD01005651
118669
Bacillota
GTA
Tyr
>WENV180517726
OCHD01001553
118669
Bacillota
GTA
Tyr
>WENV180517416
OCHD01000458
118669
Bacillota
GTA
Tyr
>WENV180518556
OCHD01080208
175915
Bacillota
GTC
Asp
>WENV180517944
OCHD01003848
280462
Bacillota
GAA
Phe
>WENV180517813
OCHD01002271
280462
Bacillota
GAA
Phe
>WENV180518315
OCHD01022686
398852
Bacillota
CTC
Glu
>WENV180518031
OCHD01005552
398852
Bacillota
CTC
Glu
>WENV180517709
OCHD01001407
398852
Bacillota
CTC
Glu
>WENV180517704
OCHD01001370
398852
Bacillota
CTC
Glu
>WENV180517400
OCHD01000432
289123
Bacillota
GGT
Thr
>WENV180518279
OCHD01018068
321248
Bacillota
TAC
Val
>WENV180517822
OCHD01002311
321248
Bacillota
TAC
Val
>WENV180517135
OCHD01000101
280483
Bacillota
GAA
Phe
>WENV180518233
OCHD01012638
285601
Bacillota
TTC
Glu
>WENV180518200
OCHD01010940
175857
Bacillota
GTG
His
>WENV180517924
OCHD01003519
175857
Bacillota
GTG
His
>WENV180517285
OCHD01000254
175857
Bacillota
GTG
His
>WENV180517136
OCHD01000101
285756
Bacillota
GCC
Gly
>WENV180516977
OCHD01000025
285756
Bacillota
GCC
Gly
>WENV180518296
OCHD01020313
398833
Bacillota
TGT
Thr
>WENV180518516
OCHD01069294
175849
Bacillota
GTC
Asp
>WENV180518373
OCHD01030473
175849
Bacillota
GTC
Asp
>WENV180518358
OCHD01028866
175849
Bacillota
GTC
Asp
>WENV180518003
OCHD01004794
175849
Bacillota
GTC
Asp
>WENV180517646
OCHD01001069
175849
Bacillota
GTC
Asp
>WENV180517945
OCHD01003848
280463
Bacillota
TTT
Lys
>WENV180517926
OCHD01003519
280463
Bacillota
TTT
Lys
>WENV180518569
OCHD01084365
179166
Bacillota
TCT
Arg
>WENV180518396
OCHD01034177
280486
Bacillota
TGC
Ala
>WENV180517504
OCHD01000630
405393
Bacillota
GCC
Gly
>WENV180517424
OCHD01000467
405393
Bacillota
GCC
Gly
>WENV180517372
OCHD01000375
405393
Bacillota
GCC
Gly
>WENV180518172
OCHD01009084
56074
Bacillota
TGA
Ser
>WENV180518130
OCHD01007469
56074
Bacillota
TGA
Ser
>WENV180517856
OCHD01002733
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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