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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180567473
OCLL01056533
280500
Bacillota
TGC
Ala
>WENV180567260
OCLL01017420
405363
Bacillota
GCA
Cys
>WENV180567258
OCLL01017420
280428
Bacillota
GAA
Phe
>WENV180567558
OCLL01089594
291579
Bacillota
GAA
Phe
>WENV180567599
OCLL01109103
176678
Bacillota
GTC
Asp
>WENV180567426
OCLL01039364
281017
Bacillota
GAA
Phe
>WENV180567343
OCLL01026819
184497
Bacillota
GGG
Pro
>WENV180567125
OCLL01006679
179563
Bacillota
GAT
Ile
>WENV180567475
OCLL01057362
215243
Bacillota
CAT
Met
>WENV180567197
OCLL01011390
190476
Bacillota
CAT
Met
>WENV180567003
OCLL01002244
280447
Bacillota
GAC
Val
>WENV180567194
OCLL01011184
5692
Bacillota
GCT
Ser
>WENV180567030
OCLL01003135
186123
Bacillota
GTC
Asp
>WENV180567084
OCLL01005074
175825
Bacillota
GAT
Ile
>WENV180567039
OCLL01003328
73009
Bacillota
CAG
Leu
>WENV180567709
OCLL01188606
399266
Bacillota
>WENV180567580
OCLL01096813
407726
Bacillota
CTG
Gln
>WENV180567312
OCLL01021341
291581
Bacillota
CGG
Pro
>WENV180567583
OCLL01101468
175859
Bacillota
TCT
Arg
>WENV180567083
OCLL01005074
280436
Bacillota
TGC
Ala
>WENV180567448
OCLL01047017
175831
Bacillota
ACG
Arg
>WENV180567031
OCLL01003135
291634
Bacillota
GAA
Phe
>WENV180567311
OCLL01021341
480322
Bacillota
CTG
Gln
>WENV180567363
OCLL01029456
401685
Bacillota
TTG
Gln
>WENV180567458
OCLL01051234
175868
Bacillota
GTT
Asn
>WENV180567720
OCLL01190784
322848
Bacillota
CTT
Lys
>WENV180567165
OCLL01009127
398854
Bacillota
CTC
Glu
>WENV180567606
OCLL01116519
291576
Bacillota
CCC
Gly
>WENV180567463
OCLL01053938
480324
Bacillota
TTG
Gln
>WENV180567567
OCLL01091933
180688
Bacillota
GTC
Asp
>WENV180567326
OCLL01023169
398857
Bacillota
TTC
Glu
>WENV180567569
OCLL01093362
204381
Bacillota
GAT
Ile
>WENV180567222
OCLL01013918
280444
Bacillota
GGT
Thr
>WENV180567259
OCLL01017420
321753
Bacillota
GCC
Gly
>WENV180567014
OCLL01002654
281445
Bacillota
GTG
His
>WENV180567447
OCLL01046899
179755
Bacillota
CCG
Arg
>WENV180567406
OCLL01036721
198522
Bacillota
GAT
Ile
>WENV180567555
OCLL01086149
46835
Bacillota
TAA
Leu
>WENV180567582
OCLL01101430
398832
Bacillota
TTC
Glu
>WENV180567665
OCLL01155250
203851
Bacillota
TCT
Arg
>WENV180567268
OCLL01017712
175915
Bacillota
GTC
Asp
>WENV180567600
OCLL01109103
399260
Bacillota
TGT
Thr
>WENV180567559
OCLL01089594
309916
Bacillota
TTT
Lys
>WENV180567416
OCLL01038456
289123
Bacillota
GGT
Thr
>WENV180567362
OCLL01029456
175857
Bacillota
GTG
His
>WENV180567317
OCLL01022155
398833
Bacillota
TGT
Thr
>WENV180567221
OCLL01013918
175849
Bacillota
GTC
Asp
>WENV180567184
OCLL01010373
317820
Bacillota
TAC
Val
>WENV180567668
OCLL01155789
328987
Bacillota
TGG
Pro
>WENV180567438
OCLL01044605
405393
Bacillota
GCC
Gly
>WENV180567193
OCLL01011184
56074
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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