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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180576275
OCLZ01001122
349107
Bacillota
GCC
Gly
>WENV180576541
OCLZ01015293
349107
Bacillota
GCC
Gly
>WENV180576843
OCLZ01114901
349107
Bacillota
GCC
Gly
>WENV180576835
OCLZ01114474
280428
Bacillota
GAA
Phe
>WENV180576376
OCLZ01003701
283739
Bacillota
AGT
Thr
>WENV180576393
OCLZ01004462
175842
Bacillota
CAC
Val
>WENV180576723
OCLZ01052906
184497
Bacillota
GGG
Pro
>WENV180576688
OCLZ01043316
405874
Bacillota
TTC
Glu
>WENV180576609
OCLZ01025094
190476
Bacillota
CAT
Met
>WENV180576288
OCLZ01001333
280447
Bacillota
GAC
Val
>WENV180576456
OCLZ01007999
175825
Bacillota
GAT
Ile
>WENV180576689
OCLZ01043316
287643
Bacillota
TAC
Val
>WENV180576533
OCLZ01013939
73009
Bacillota
CAG
Leu
>WENV180576632
OCLZ01030039
283738
Bacillota
CGT
Thr
>WENV180576406
OCLZ01005072
175859
Bacillota
TCT
Arg
>WENV180576455
OCLZ01007999
280436
Bacillota
TGC
Ala
>WENV180576214
OCLZ01000580
175831
Bacillota
ACG
Arg
>WENV180576728
OCLZ01055185
295350
Bacillota
TGC
Ala
>WENV180576716
OCLZ01050879
289713
Bacillota
TGT
Thr
>WENV180576475
OCLZ01009364
480322
Bacillota
CTG
Gln
>WENV180576704
OCLZ01047304
401685
Bacillota
TTG
Gln
>WENV180576520
OCLZ01012422
175868
Bacillota
GTT
Asn
>WENV180576303
OCLZ01001495
175868
Bacillota
GTT
Asn
>WENV180576519
OCLZ01012422
398854
Bacillota
CTC
Glu
>WENV180576337
OCLZ01002213
480324
Bacillota
TTG
Gln
>WENV180576568
OCLZ01018968
497729
Bacillota
CCA
Trp
>WENV180576792
OCLZ01094016
432453
Bacillota
TTC
Glu
>WENV180576832
OCLZ01114426
400600
Bacillota
TTG
Gln
>WENV180576683
OCLZ01043102
398857
Bacillota
TTC
Glu
>WENV180576700
OCLZ01046940
280444
Bacillota
GGT
Thr
>WENV180576378
OCLZ01003855
291597
Bacillota
TGC
Ala
>WENV180576218
OCLZ01000622
179755
Bacillota
CCG
Arg
>WENV180576760
OCLZ01069249
289154
Bacillota
CTT
Lys
>WENV180576726
OCLZ01053774
289761
Bacillota
TTT
Lys
>WENV180576818
OCLZ01112198
46835
Bacillota
TAA
Leu
>WENV180576610
OCLZ01025094
398832
Bacillota
TTC
Glu
>WENV180576486
OCLZ01009920
398832
Bacillota
TTC
Glu
>WENV180576453
OCLZ01007993
334757
Bacillota
TTT
Lys
>WENV180576793
OCLZ01094016
289715
Bacillota
TAC
Val
>WENV180576731
OCLZ01055973
398852
Bacillota
CTC
Glu
>WENV180576491
OCLZ01010614
309916
Bacillota
TTT
Lys
>WENV180576301
OCLZ01001491
280483
Bacillota
GAA
Phe
>WENV180576703
OCLZ01047304
175857
Bacillota
GTG
His
>WENV180576302
OCLZ01001491
285756
Bacillota
GCC
Gly
>WENV180576213
OCLZ01000573
398833
Bacillota
TGT
Thr
>WENV180576686
OCLZ01043316
403766
Bacillota
TTG
Gln
>WENV180576643
OCLZ01033197
175849
Bacillota
GTC
Asp
>WENV180576507
OCLZ01012034
156219
Bacillota
GTG
His
>WENV180576729
OCLZ01055506
56074
Bacillota
TGA
Ser
>WENV180576179
OCLZ01000287
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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