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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180596787
OCPI01001512
176499
Actinomycetota
CAT
Met
>WENV180596522
OCPI01000036
175907
Actinomycetota
TAC
Val
>WENV180596783
OCPI01001287
283311
Actinomycetota
CCT
Arg
>WENV180596773
OCPI01001162
280498
Actinomycetota
GTT
Asn
>WENV180596774
OCPI01001169
280498
Actinomycetota
GTT
Asn
>WENV180596775
OCPI01001169
280498
Actinomycetota
GTT
Asn
>WENV180596651
OCPI01000189
184065
Actinomycetota
TGG
Pro
>WENV180596806
OCPI01002533
295964
Actinomycetota
GTT
Asn
>WENV180596734
OCPI01000495
295964
Actinomycetota
GTT
Asn
>WENV180596698
OCPI01000331
56083
Actinomycetota
CGA
Ser
>WENV180596731
OCPI01000482
140768
Actinomycetota
TAG
Leu
>WENV180596554
OCPI01000074
284890
Actinomycetota
CTT
Lys
>WENV180596555
OCPI01000074
284890
Actinomycetota
CTT
Lys
>WENV180596772
OCPI01001105
176075
Actinomycetota
TCT
Arg
>WENV180596813
OCPI01003949
176078
Actinomycetota
GGG
Pro
>WENV180596794
OCPI01001751
176078
Actinomycetota
GGG
Pro
>WENV180596863
OCPI01018513
482604
Actinomycetota
TTG
Gln
>WENV180596558
OCPI01000074
284889
Actinomycetota
CTC
Glu
>WENV180596745
OCPI01000602
284889
Actinomycetota
CTC
Glu
>WENV180596687
OCPI01000284
59689
Actinomycetota
GGA
Ser
>WENV180596862
OCPI01018511
175837
Actinomycetota
ACG
Arg
>WENV180596754
OCPI01000733
175837
Actinomycetota
ACG
Arg
>WENV180596753
OCPI01000733
175837
Actinomycetota
ACG
Arg
>WENV180596702
OCPI01000355
29393
Actinomycetota
GCT
Ser
>WENV180596721
OCPI01000425
280549
Actinomycetota
CAC
Val
>WENV180596647
OCPI01000180
280549
Actinomycetota
CAC
Val
>WENV180596790
OCPI01001553
380862
Actinomycetota
CAC
Val
>WENV180596855
OCPI01012762
380862
Actinomycetota
CAC
Val
>WENV180596576
OCPI01000084
184493
Actinomycetota
GGG
Pro
>WENV180596635
OCPI01000161
443526
Actinomycetota
CAC
Val
>WENV180596737
OCPI01000524
24925
Actinomycetota
GCT
Ser
>WENV180596685
OCPI01000284
349164
Actinomycetota
CTC
Glu
>WENV180596776
OCPI01001199
349164
Actinomycetota
CTC
Glu
>WENV180596617
OCPI01000140
398947
Actinomycetota
CCA
Trp
>WENV180596789
OCPI01001545
280702
Actinomycetota
GGC
Ala
>WENV180596788
OCPI01001545
280702
Actinomycetota
GGC
Ala
>WENV180596713
OCPI01000387
176077
Actinomycetota
CAT
Met
>WENV180596760
OCPI01000780
283312
Actinomycetota
GTG
His
>WENV180596752
OCPI01000708
47453
Actinomycetota
GAG
Leu
>WENV180596690
OCPI01000294
21508
Actinomycetota
GAG
Leu
>WENV180596513
OCPI01000030
285876
Actinomycetota
CGT
Thr
>WENV180596749
OCPI01000663
280524
Actinomycetota
TGC
Ala
>WENV180596708
OCPI01000371
283313
Actinomycetota
CCG
Arg
>WENV180596684
OCPI01000282
398948
Actinomycetota
TTC
Glu
>WENV180596637
OCPI01000166
150272
Actinomycetota
TAA
Leu
>WENV180596700
OCPI01000355
117777
Actinomycetota
>WENV180596792
OCPI01001604
280523
Actinomycetota
GGC
Ala
>WENV180596770
OCPI01001056
280523
Actinomycetota
GGC
Ala
>WENV180596701
OCPI01000355
175949
Actinomycetota
CAT
Met
>WENV180596766
OCPI01001001
227544
Actinomycetota
TAC
Val
>WENV180596786
OCPI01001481
191955
Actinomycetota
TGT
Thr
>WENV180596666
OCPI01000249
180071
Actinomycetota
CAT
Met
>WENV180596759
OCPI01000771
20415
Actinomycetota
GAG
Leu
>WENV180596769
OCPI01001049
280544
Actinomycetota
GTG
His
>WENV180596732
OCPI01000482
280496
Actinomycetota
CGT
Thr
>WENV180596750
OCPI01000687
280703
Actinomycetota
CCT
Arg
>WENV180596801
OCPI01002092
140879
Actinomycetota
TAG
Leu
>WENV180596736
OCPI01000522
184157
Actinomycetota
TGG
Pro
>WENV180596632
OCPI01000161
466038
Actinomycetota
GAC
Val
>WENV180596699
OCPI01000337
178569
Actinomycetota
CAT
Met
>WENV180596746
OCPI01000621
280450
Actinomycetota
TTT
Lys
>WENV180596854
OCPI01012762
468141
Actinomycetota
GAC
Val
>WENV180596720
OCPI01000425
468141
Actinomycetota
GAC
Val
>WENV180596646
OCPI01000180
468141
Actinomycetota
GAC
Val
>WENV180596730
OCPI01000482
323758
Actinomycetota
CGT
Thr
>WENV180596739
OCPI01000531
358727
Actinomycetota
CCG
Arg
>WENV180596656
OCPI01000207
480329
Actinomycetota
CCC
Gly
>WENV180596556
OCPI01000074
284887
Actinomycetota
GCC
Gly
>WENV180596680
OCPI01000280
284887
Actinomycetota
GCC
Gly
>WENV180596584
OCPI01000099
99865
Actinomycetota
CAG
Leu
>WENV180596761
OCPI01000802
222475
Actinomycetota
CTT
Lys
>WENV180596729
OCPI01000475
222475
Actinomycetota
CTT
Lys
>WENV180596777
OCPI01001199
398853
Actinomycetota
CTG
Gln
>WENV180596722
OCPI01000430
175843
Actinomycetota
CAA
Leu
>WENV180596785
OCPI01001395
175843
Actinomycetota
CAA
Leu
>WENV180596616
OCPI01000140
3983
Actinomycetota
GCT
Ser
>WENV180596686
OCPI01000284
430848
Actinomycetota
CTG
Gln
>WENV180596697
OCPI01000324
176507
Actinomycetota
CAT
Met
>WENV180596784
OCPI01001387
60767
Actinomycetota
TGA
Ser
>WENV180596804
OCPI01002382
506175
Actinomycetota
TTG
Gln
>WENV180596800
OCPI01002092
280470
Actinomycetota
CGT
Thr
>WENV180596583
OCPI01000099
480376
Actinomycetota
CCC
Gly
>WENV180596610
OCPI01000133
442299
Actinomycetota
CTG
Gln
>WENV180596717
OCPI01000406
482493
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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