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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180619104
OCQB01001444
295385
Bacteroidota
CCA
Trp
>WENV180618544
OCQB01000221
117741
Bacteroidota
TAG
Leu
>WENV180618276
OCQB01000023
398829
Bacteroidota
CCT
Arg
>WENV180618426
OCQB01000107
175838
Bacteroidota
GTT
Asn
>WENV180618427
OCQB01000107
175838
Bacteroidota
GTT
Asn
>WENV180619516
OCQB01005084
404226
Bacteroidota
CCT
Arg
>WENV180618805
OCQB01000558
289031
Bacteroidota
CAT
Met
>WENV180620167
OCQB01035037
280553
Bacteroidota
TTT
Lys
>WENV180619155
OCQB01001773
280553
Bacteroidota
TTT
Lys
>WENV180620723
OCQB01277003
280557
Bacteroidota
CAT
Met
>WENV180618543
OCQB01000219
280557
Bacteroidota
CAT
Met
>WENV180618394
OCQB01000087
20206
Bacteroidota
GGA
Ser
>WENV180618345
OCQB01000057
483416
Bacteroidota
CTG
Gln
>WENV180619725
OCQB01009914
398871
Bacteroidota
TTC
Glu
>WENV180619515
OCQB01005084
398871
Bacteroidota
TTC
Glu
>WENV180619514
OCQB01005084
398871
Bacteroidota
TTC
Glu
>WENV180618421
OCQB01000104
201819
Bacteroidota
CAT
Met
>WENV180619023
OCQB01001120
56493
Bacteroidota
TGA
Ser
>WENV180618449
OCQB01000126
175903
Bacteroidota
GTG
His
>WENV180619479
OCQB01004597
351598
Bacteroidota
CGG
Pro
>WENV180619062
OCQB01001309
351598
Bacteroidota
CGG
Pro
>WENV180618366
OCQB01000069
351598
Bacteroidota
CGG
Pro
>WENV180620166
OCQB01034551
291612
Bacteroidota
>WENV180619047
OCQB01001210
118089
Bacteroidota
TAG
Leu
>WENV180620115
OCQB01029993
169545
Bacteroidota
TGG
Pro
>WENV180619705
OCQB01009273
280530
Bacteroidota
CCA
Trp
>WENV180619702
OCQB01009247
175936
Bacteroidota
CAT
Met
>WENV180619465
OCQB01004375
203954
Bacteroidota
GTC
Asp
>WENV180619464
OCQB01004375
203954
Bacteroidota
GTC
Asp
>WENV180619605
OCQB01006888
178907
Bacteroidota
TCT
Arg
>WENV180620718
OCQB01276117
172085
Bacteroidota
TAC
Val
>WENV180618696
OCQB01000394
405877
Bacteroidota
GGT
Thr
>WENV180618958
OCQB01000899
405877
Bacteroidota
GGT
Thr
>WENV180618907
OCQB01000767
182267
Bacteroidota
GTT
Asn
>WENV180618906
OCQB01000767
182267
Bacteroidota
GTT
Asn
>WENV180618905
OCQB01000767
182267
Bacteroidota
GTT
Asn
>WENV180618770
OCQB01000505
20449
Bacteroidota
GGA
Ser
>WENV180619038
OCQB01001180
21127
Bacteroidota
GGA
Ser
>WENV180618776
OCQB01000509
56072
Bacteroidota
TAA
Leu
>WENV180618275
OCQB01000023
56072
Bacteroidota
TAA
Leu
>WENV180618882
OCQB01000686
57807
Bacteroidota
TGA
Ser
>WENV180620203
OCQB01039356
175886
Bacteroidota
GGC
Ala
>WENV180618502
OCQB01000175
175902
Bacteroidota
GGC
Ala
>WENV180620053
OCQB01025063
179697
Bacteroidota
TGT
Thr
>WENV180619450
OCQB01004199
398860
Bacteroidota
CTC
Glu
>WENV180619135
OCQB01001624
480404
Bacteroidota
TTG
Gln
>WENV180619356
OCQB01003204
174201
Bacteroidota
GGG
Pro
>WENV180619296
OCQB01002779
174201
Bacteroidota
GGG
Pro
>WENV180619026
OCQB01001141
174201
Bacteroidota
GGG
Pro
>WENV180618517
OCQB01000186
174201
Bacteroidota
GGG
Pro
>WENV180618423
OCQB01000105
280451
Bacteroidota
CGT
Thr
>WENV180619660
OCQB01008046
418894
Bacteroidota
TTC
Glu
>WENV180620642
OCQB01167217
99847
Bacteroidota
GTA
Tyr
>WENV180618391
OCQB01000085
99847
Bacteroidota
GTA
Tyr
>WENV180619772
OCQB01011409
399200
Bacteroidota
CAT
Met
>WENV180619741
OCQB01010409
156078
Bacteroidota
TAC
Val
>WENV180620021
OCQB01022976
332896
Bacteroidota
TTT
Lys
>WENV180618393
OCQB01000087
488746
Bacteroidota
CTG
Gln
>WENV180619067
OCQB01001318
399026
Bacteroidota
CCT
Arg
>WENV180619969
OCQB01019650
186108
Bacteroidota
GTT
Asn
>WENV180619313
OCQB01002865
229246
Bacteroidota
GGC
Ala
>WENV180619312
OCQB01002864
73011
Bacteroidota
CAA
Leu
>WENV180620103
OCQB01028258
280515
Bacteroidota
CCA
Trp
>WENV180618230
OCQB01000012
183889
Bacteroidota
GGC
Ala
>WENV180618894
OCQB01000735
480318
Bacteroidota
CTG
Gln
>WENV180619926
OCQB01016866
186142
Bacteroidota
GAT
Ile
>WENV180618966
OCQB01000927
398828
Bacteroidota
CCG
Arg
>WENV180619215
OCQB01002105
74084
Bacteroidota
CAG
Leu
>WENV180619203
OCQB01002009
480325
Bacteroidota
CTG
Gln
>WENV180619202
OCQB01002009
480325
Bacteroidota
CTG
Gln
>WENV180618559
OCQB01000241
140771
Bacteroidota
>WENV180619519
OCQB01005105
176192
Bacteroidota
TCT
Arg
>WENV180619517
OCQB01005102
69204
Bacteroidota
TGA
Ser
>WENV180618831
OCQB01000596
69204
Bacteroidota
TGA
Ser
>WENV180618509
OCQB01000183
69204
Bacteroidota
TGA
Ser
>WENV180618408
OCQB01000098
69204
Bacteroidota
TGA
Ser
>WENV180619908
OCQB01016150
280446
Bacteroidota
TTT
Lys
>WENV180619710
OCQB01009395
280446
Bacteroidota
TTT
Lys
>WENV180618480
OCQB01000153
280446
Bacteroidota
TTT
Lys
>WENV180618878
OCQB01000681
484496
Bacteroidota
TTG
Gln
>WENV180618322
OCQB01000043
484496
Bacteroidota
TTG
Gln
>WENV180618321
OCQB01000039
27502
Bacteroidota
GGA
Ser
>WENV180620073
OCQB01026822
285750
Bacteroidota
CCC
Gly
>WENV180619809
OCQB01012561
373714
Bacteroidota
GCC
Gly
>WENV180619628
OCQB01007493
117804
Bacteroidota
TAG
Leu
>WENV180619927
OCQB01016866
186143
Bacteroidota
TGC
Ala
>WENV180619787
OCQB01012050
365112
Bacteroidota
TTT
Lys
>WENV180619462
OCQB01004330
365112
Bacteroidota
TTT
Lys
>WENV180619236
OCQB01002307
365112
Bacteroidota
TTT
Lys
>WENV180618854
OCQB01000655
365112
Bacteroidota
TTT
Lys
>WENV180618554
OCQB01000228
365112
Bacteroidota
TTT
Lys
>WENV180619059
OCQB01001275
398836
Bacteroidota
GCA
Cys
>WENV180619058
OCQB01001275
398836
Bacteroidota
GCA
Cys
>WENV180619031
OCQB01001151
398836
Bacteroidota
GCA
Cys
>WENV180618312
OCQB01000036
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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