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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180682067
OCVV012823192
175883
Actinomycetota
GAT
Ile
>WENV180682069
OCVV012823192
175883
Actinomycetota
GAT
Ile
>WENV180682076
OCVV012823192
175883
Actinomycetota
GAT
Ile
>WENV180682078
OCVV012823192
175883
Actinomycetota
GAT
Ile
>WENV180660643
OCVV010952877
285746
Actinomycetota
GGC
Ala
>WENV180660644
OCVV010952877
285746
Actinomycetota
GGC
Ala
>WENV180678131
OCVV011879277
280503
Actinomycetota
CCT
Arg
>WENV180678132
OCVV011879277
280503
Actinomycetota
CCT
Arg
>WENV180682071
OCVV012823192
280503
Actinomycetota
CCT
Arg
>WENV180682080
OCVV012823192
280503
Actinomycetota
CCT
Arg
>WENV180658745
OCVV010796656
186055
Actinomycetota
ACG
Arg
>WENV180658746
OCVV010796656
186055
Actinomycetota
ACG
Arg
>WENV180681425
OCVV012769188
186055
Actinomycetota
ACG
Arg
>WENV180681426
OCVV012769188
186055
Actinomycetota
ACG
Arg
>WENV180681427
OCVV012769188
186055
Actinomycetota
ACG
Arg
>WENV180681428
OCVV012769188
186055
Actinomycetota
ACG
Arg
>WENV180676032
OCVV011361202
398843
Actinomycetota
GTT
Asn
>WENV180676033
OCVV011361202
398843
Actinomycetota
GTT
Asn
>WENV180676037
OCVV011361202
398843
Actinomycetota
GTT
Asn
>WENV180676038
OCVV011361202
398843
Actinomycetota
GTT
Asn
>WENV180661240
OCVV011000061
76168
Actinomycetota
CAG
Leu
>WENV180661239
OCVV011000061
76168
Actinomycetota
CAG
Leu
>WENV180676069
OCVV011361474
484283
Actinomycetota
CTG
Gln
>WENV180676067
OCVV011361474
484283
Actinomycetota
CTG
Gln
>WENV180686763
OCVV012895573
481719
Actinomycetota
GCA
Cys
>WENV180686761
OCVV012895573
481719
Actinomycetota
GCA
Cys
>WENV180685832
OCVV012877571
481719
Actinomycetota
GCA
Cys
>WENV180685829
OCVV012877571
481719
Actinomycetota
GCA
Cys
>WENV180681798
OCVV012801555
481719
Actinomycetota
GCA
Cys
>WENV180681797
OCVV012801555
481719
Actinomycetota
GCA
Cys
>WENV180686764
OCVV012895573
291585
Actinomycetota
GCC
Gly
>WENV180686762
OCVV012895573
291585
Actinomycetota
GCC
Gly
>WENV180685979
OCVV012879980
291585
Actinomycetota
GCC
Gly
>WENV180685977
OCVV012879980
291585
Actinomycetota
GCC
Gly
>WENV180685831
OCVV012877571
291585
Actinomycetota
GCC
Gly
>WENV180685828
OCVV012877571
291585
Actinomycetota
GCC
Gly
>WENV180676243
OCVV011361776
280536
Actinomycetota
CTT
Lys
>WENV180676242
OCVV011361776
280536
Actinomycetota
CTT
Lys
>WENV180676236
OCVV011361776
280536
Actinomycetota
CTT
Lys
>WENV180676235
OCVV011361776
280536
Actinomycetota
CTT
Lys
>WENV180655899
OCVV010493453
175926
Actinomycetota
CAT
Met
>WENV180655900
OCVV010493453
175926
Actinomycetota
CAT
Met
>WENV180682070
OCVV012823192
175926
Actinomycetota
CAT
Met
>WENV180682079
OCVV012823192
175926
Actinomycetota
CAT
Met
>WENV180676238
OCVV011361776
483206
Actinomycetota
CTG
Gln
>WENV180676231
OCVV011361776
483206
Actinomycetota
CTG
Gln
>WENV180669223
OCVV011277284
283352
Actinomycetota
GCC
Gly
>WENV180669226
OCVV011277284
283352
Actinomycetota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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