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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180717543
ODGE01000040
282645
Betaproteobacteria
GCC
Gly
>WENV180717544
ODGE01000040
282645
Betaproteobacteria
GCC
Gly
>WENV180717615
ODGE01000189
282645
Betaproteobacteria
GCC
Gly
>WENV180717616
ODGE01000189
282645
Betaproteobacteria
GCC
Gly
>WENV180718095
ODGE01087891
282645
Betaproteobacteria
GCC
Gly
>WENV180717484
ODGE01000013
285019
Betaproteobacteria
CCT
Arg
>WENV180717634
ODGE01000286
280600
Betaproteobacteria
TGT
Thr
>WENV180717635
ODGE01000286
280600
Betaproteobacteria
TGT
Thr
>WENV180717539
ODGE01000037
118105
Betaproteobacteria
CAA
Leu
>WENV180717564
ODGE01000056
281524
Betaproteobacteria
GAA
Phe
>WENV180717622
ODGE01000224
175971
Betaproteobacteria
GTC
Asp
>WENV180717638
ODGE01000299
175971
Betaproteobacteria
GTC
Asp
>WENV180717640
ODGE01000299
175971
Betaproteobacteria
GTC
Asp
>WENV180717562
ODGE01000054
188039
Betaproteobacteria
TCT
Arg
>WENV180717585
ODGE01000114
280601
Betaproteobacteria
TTG
Gln
>WENV180717586
ODGE01000114
280601
Betaproteobacteria
TTG
Gln
>WENV180717587
ODGE01000114
280601
Betaproteobacteria
TTG
Gln
>WENV180717541
ODGE01000039
77402
Betaproteobacteria
CAG
Leu
>WENV180717553
ODGE01000044
414048
Betaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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