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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180719463
ODGJ01001875
184065
Actinomycetota
TGG
Pro
>WENV180719280
ODGJ01000543
194706
Actinomycetota
CAT
Met
>WENV180719566
ODGJ01002769
194706
Actinomycetota
CAT
Met
>WENV180720387
ODGJ01040475
284890
Actinomycetota
CTT
Lys
>WENV180720469
ODGJ01049212
284890
Actinomycetota
CTT
Lys
>WENV180719829
ODGJ01006647
284889
Actinomycetota
CTC
Glu
>WENV180720382
ODGJ01039720
284889
Actinomycetota
CTC
Glu
>WENV180720068
ODGJ01015091
184493
Actinomycetota
GGG
Pro
>WENV180720131
ODGJ01017933
184493
Actinomycetota
GGG
Pro
>WENV180720200
ODGJ01023116
184493
Actinomycetota
GGG
Pro
>WENV180720566
ODGJ01068990
443526
Actinomycetota
CAC
Val
>WENV180719671
ODGJ01004202
285880
Actinomycetota
TCT
Arg
>WENV180719396
ODGJ01001245
292656
Actinomycetota
ACG
Arg
>WENV180719860
ODGJ01007717
47453
Actinomycetota
GAG
Leu
>WENV180720776
ODGJ01153414
281635
Actinomycetota
GGC
Ala
>WENV180720248
ODGJ01025835
281635
Actinomycetota
GGC
Ala
>WENV180719803
ODGJ01005973
281635
Actinomycetota
GGC
Ala
>WENV180720785
ODGJ01162760
285876
Actinomycetota
CGT
Thr
>WENV180720420
ODGJ01044007
285876
Actinomycetota
CGT
Thr
>WENV180719974
ODGJ01012063
180944
Actinomycetota
GTC
Asp
>WENV180719914
ODGJ01009692
287251
Actinomycetota
CTT
Lys
>WENV180720417
ODGJ01043256
180071
Actinomycetota
CAT
Met
>WENV180719608
ODGJ01003326
221845
Actinomycetota
GAT
Ile
>WENV180719866
ODGJ01007960
481756
Actinomycetota
TCC
Gly
>WENV180720114
ODGJ01016747
290430
Actinomycetota
TCT
Arg
>WENV180719601
ODGJ01003279
285877
Actinomycetota
CCG
Arg
>WENV180720400
ODGJ01041736
187640
Actinomycetota
TGT
Thr
>WENV180719716
ODGJ01004689
180945
Actinomycetota
CAT
Met
>WENV180720447
ODGJ01045649
284887
Actinomycetota
GCC
Gly
>WENV180720178
ODGJ01021315
292678
Actinomycetota
CTT
Lys
>WENV180720177
ODGJ01021315
292678
Actinomycetota
CTT
Lys
>WENV180720421
ODGJ01044013
297606
Actinomycetota
CCT
Arg
>WENV180719924
ODGJ01010074
482493
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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